Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7932 | 24019;24020;24021 | chr2:178719698;178719697;178719696 | chr2:179584425;179584424;179584423 |
N2AB | 7615 | 23068;23069;23070 | chr2:178719698;178719697;178719696 | chr2:179584425;179584424;179584423 |
N2A | 6688 | 20287;20288;20289 | chr2:178719698;178719697;178719696 | chr2:179584425;179584424;179584423 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1271514661 | None | 0.117 | N | 0.262 | 0.05 | 0.107399877778 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/E | rs1271514661 | None | 0.117 | N | 0.262 | 0.05 | 0.107399877778 | gnomAD-4.0.0 | 6.57428E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47024E-05 | 0 | 0 |
D/G | None | None | None | N | 0.19 | 0.116 | 0.0666544352282 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1381 | likely_benign | 0.2214 | benign | -0.399 | Destabilizing | 0.027 | N | 0.289 | neutral | N | 0.454415121 | None | None | N |
D/C | 0.4659 | ambiguous | 0.6282 | pathogenic | -0.033 | Destabilizing | 0.935 | D | 0.265 | neutral | None | None | None | None | N |
D/E | 0.2005 | likely_benign | 0.2974 | benign | -0.355 | Destabilizing | 0.117 | N | 0.262 | neutral | N | 0.452337979 | None | None | N |
D/F | 0.5108 | ambiguous | 0.6626 | pathogenic | -0.327 | Destabilizing | 0.555 | D | 0.286 | neutral | None | None | None | None | N |
D/G | 0.0867 | likely_benign | 0.1314 | benign | -0.635 | Destabilizing | None | N | 0.19 | neutral | N | 0.417380727 | None | None | N |
D/H | 0.2185 | likely_benign | 0.3245 | benign | -0.382 | Destabilizing | 0.915 | D | 0.237 | neutral | N | 0.474431933 | None | None | N |
D/I | 0.3762 | ambiguous | 0.55 | ambiguous | 0.187 | Stabilizing | 0.005 | N | 0.271 | neutral | None | None | None | None | N |
D/K | 0.3347 | likely_benign | 0.4945 | ambiguous | -0.118 | Destabilizing | 0.149 | N | 0.337 | neutral | None | None | None | None | N |
D/L | 0.3443 | ambiguous | 0.506 | ambiguous | 0.187 | Stabilizing | 0.081 | N | 0.357 | neutral | None | None | None | None | N |
D/M | 0.582 | likely_pathogenic | 0.7327 | pathogenic | 0.457 | Stabilizing | 0.824 | D | 0.255 | neutral | None | None | None | None | N |
D/N | 0.0803 | likely_benign | 0.0963 | benign | -0.294 | Destabilizing | 0.117 | N | 0.269 | neutral | N | 0.479085334 | None | None | N |
D/P | 0.6587 | likely_pathogenic | 0.7776 | pathogenic | 0.015 | Stabilizing | 0.555 | D | 0.281 | neutral | None | None | None | None | N |
D/Q | 0.3103 | likely_benign | 0.4825 | ambiguous | -0.229 | Destabilizing | 0.555 | D | 0.259 | neutral | None | None | None | None | N |
D/R | 0.3371 | likely_benign | 0.5102 | ambiguous | 0.061 | Stabilizing | 0.38 | N | 0.29 | neutral | None | None | None | None | N |
D/S | 0.0816 | likely_benign | 0.113 | benign | -0.465 | Destabilizing | 0.001 | N | 0.132 | neutral | None | None | None | None | N |
D/T | 0.1693 | likely_benign | 0.2527 | benign | -0.29 | Destabilizing | 0.081 | N | 0.313 | neutral | None | None | None | None | N |
D/V | 0.2247 | likely_benign | 0.3394 | benign | 0.015 | Stabilizing | 0.062 | N | 0.355 | neutral | N | 0.47724309 | None | None | N |
D/W | 0.818 | likely_pathogenic | 0.9058 | pathogenic | -0.223 | Destabilizing | 0.935 | D | 0.422 | neutral | None | None | None | None | N |
D/Y | 0.2236 | likely_benign | 0.3219 | benign | -0.125 | Destabilizing | 0.741 | D | 0.265 | neutral | N | 0.473128487 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.