Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7935 | 24028;24029;24030 | chr2:178719689;178719688;178719687 | chr2:179584416;179584415;179584414 |
N2AB | 7618 | 23077;23078;23079 | chr2:178719689;178719688;178719687 | chr2:179584416;179584415;179584414 |
N2A | 6691 | 20296;20297;20298 | chr2:178719689;178719688;178719687 | chr2:179584416;179584415;179584414 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Y | None | None | 0.002 | N | 0.178 | 0.186 | 0.233150807113 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.5022 | ambiguous | 0.5878 | pathogenic | -1.525 | Destabilizing | 0.495 | N | 0.563 | neutral | None | None | None | None | N |
H/C | 0.1891 | likely_benign | 0.2162 | benign | -0.753 | Destabilizing | 0.007 | N | 0.597 | neutral | None | None | None | None | N |
H/D | 0.5303 | ambiguous | 0.593 | pathogenic | -1.42 | Destabilizing | 0.642 | D | 0.655 | neutral | D | 0.530653957 | None | None | N |
H/E | 0.5295 | ambiguous | 0.6175 | pathogenic | -1.251 | Destabilizing | 0.329 | N | 0.457 | neutral | None | None | None | None | N |
H/F | 0.2813 | likely_benign | 0.3006 | benign | 0.212 | Stabilizing | 0.543 | D | 0.655 | neutral | None | None | None | None | N |
H/G | 0.4811 | ambiguous | 0.5421 | ambiguous | -1.954 | Destabilizing | 0.828 | D | 0.627 | neutral | None | None | None | None | N |
H/I | 0.3728 | ambiguous | 0.4383 | ambiguous | -0.276 | Destabilizing | 0.704 | D | 0.675 | prob.neutral | None | None | None | None | N |
H/K | 0.3637 | ambiguous | 0.4721 | ambiguous | -1.12 | Destabilizing | 0.543 | D | 0.627 | neutral | None | None | None | None | N |
H/L | 0.1614 | likely_benign | 0.1921 | benign | -0.276 | Destabilizing | 0.27 | N | 0.595 | neutral | N | 0.51468164 | None | None | N |
H/M | 0.5607 | ambiguous | 0.6107 | pathogenic | -0.459 | Destabilizing | 0.981 | D | 0.644 | neutral | None | None | None | None | N |
H/N | 0.1618 | likely_benign | 0.1761 | benign | -1.541 | Destabilizing | 0.784 | D | 0.549 | neutral | N | 0.484491469 | None | None | N |
H/P | 0.5266 | ambiguous | 0.6106 | pathogenic | -0.679 | Destabilizing | 0.975 | D | 0.684 | prob.neutral | N | 0.484744958 | None | None | N |
H/Q | 0.2451 | likely_benign | 0.2937 | benign | -1.137 | Destabilizing | 0.065 | N | 0.321 | neutral | N | 0.489264409 | None | None | N |
H/R | 0.1346 | likely_benign | 0.165 | benign | -1.581 | Destabilizing | 0.642 | D | 0.578 | neutral | N | 0.521957116 | None | None | N |
H/S | 0.3696 | ambiguous | 0.4279 | ambiguous | -1.616 | Destabilizing | 0.704 | D | 0.617 | neutral | None | None | None | None | N |
H/T | 0.3782 | ambiguous | 0.4504 | ambiguous | -1.329 | Destabilizing | 0.828 | D | 0.639 | neutral | None | None | None | None | N |
H/V | 0.3278 | likely_benign | 0.3917 | ambiguous | -0.679 | Destabilizing | 0.704 | D | 0.639 | neutral | None | None | None | None | N |
H/W | 0.3534 | ambiguous | 0.3694 | ambiguous | 0.634 | Stabilizing | 0.985 | D | 0.637 | neutral | None | None | None | None | N |
H/Y | 0.0648 | likely_benign | 0.0634 | benign | 0.534 | Stabilizing | 0.002 | N | 0.178 | neutral | N | 0.394296876 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.