Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7945 | 24058;24059;24060 | chr2:178719659;178719658;178719657 | chr2:179584386;179584385;179584384 |
N2AB | 7628 | 23107;23108;23109 | chr2:178719659;178719658;178719657 | chr2:179584386;179584385;179584384 |
N2A | 6701 | 20326;20327;20328 | chr2:178719659;178719658;178719657 | chr2:179584386;179584385;179584384 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs867642789 | None | 0.013 | N | 0.372 | 0.346 | 0.37281450598 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93573E-04 | None | 0 | 0 | 0 | 0 | 0 |
S/C | rs867642789 | None | 0.013 | N | 0.372 | 0.346 | 0.37281450598 | gnomAD-4.0.0 | 2.30631E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.36533E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0911 | likely_benign | 0.0979 | benign | -0.762 | Destabilizing | 0.139 | N | 0.325 | neutral | N | 0.495229117 | None | None | N |
S/C | 0.1105 | likely_benign | 0.1252 | benign | -0.549 | Destabilizing | 0.013 | N | 0.372 | neutral | N | 0.486634744 | None | None | N |
S/D | 0.6357 | likely_pathogenic | 0.6827 | pathogenic | -1.451 | Destabilizing | 0.704 | D | 0.443 | neutral | None | None | None | None | N |
S/E | 0.6445 | likely_pathogenic | 0.6939 | pathogenic | -1.235 | Destabilizing | 0.704 | D | 0.445 | neutral | None | None | None | None | N |
S/F | 0.1529 | likely_benign | 0.1793 | benign | -0.594 | Destabilizing | 0.927 | D | 0.603 | neutral | N | 0.497395165 | None | None | N |
S/G | 0.122 | likely_benign | 0.1227 | benign | -1.181 | Destabilizing | 0.495 | N | 0.377 | neutral | None | None | None | None | N |
S/H | 0.3341 | likely_benign | 0.3701 | ambiguous | -1.559 | Destabilizing | 0.981 | D | 0.57 | neutral | None | None | None | None | N |
S/I | 0.1417 | likely_benign | 0.1558 | benign | 0.311 | Stabilizing | 0.543 | D | 0.561 | neutral | None | None | None | None | N |
S/K | 0.6943 | likely_pathogenic | 0.7414 | pathogenic | -0.174 | Destabilizing | 0.543 | D | 0.429 | neutral | None | None | None | None | N |
S/L | 0.0922 | likely_benign | 0.1037 | benign | 0.311 | Stabilizing | 0.329 | N | 0.479 | neutral | None | None | None | None | N |
S/M | 0.1828 | likely_benign | 0.2098 | benign | 0.168 | Stabilizing | 0.944 | D | 0.563 | neutral | None | None | None | None | N |
S/N | 0.1793 | likely_benign | 0.204 | benign | -0.968 | Destabilizing | 0.704 | D | 0.457 | neutral | None | None | None | None | N |
S/P | 0.9289 | likely_pathogenic | 0.9323 | pathogenic | -0.011 | Destabilizing | 0.927 | D | 0.554 | neutral | D | 0.522096012 | None | None | N |
S/Q | 0.5177 | ambiguous | 0.5692 | pathogenic | -0.651 | Destabilizing | 0.944 | D | 0.52 | neutral | None | None | None | None | N |
S/R | 0.5604 | ambiguous | 0.6023 | pathogenic | -0.649 | Destabilizing | 0.031 | N | 0.388 | neutral | None | None | None | None | N |
S/T | 0.0764 | likely_benign | 0.0853 | benign | -0.585 | Destabilizing | 0.01 | N | 0.221 | neutral | N | 0.443858905 | None | None | N |
S/V | 0.1542 | likely_benign | 0.1738 | benign | -0.011 | Destabilizing | 0.031 | N | 0.499 | neutral | None | None | None | None | N |
S/W | 0.3435 | ambiguous | 0.3672 | ambiguous | -0.909 | Destabilizing | 0.995 | D | 0.701 | prob.neutral | None | None | None | None | N |
S/Y | 0.1564 | likely_benign | 0.1776 | benign | -0.42 | Destabilizing | 0.975 | D | 0.595 | neutral | N | 0.497902144 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.