Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7949 | 24070;24071;24072 | chr2:178719647;178719646;178719645 | chr2:179584374;179584373;179584372 |
N2AB | 7632 | 23119;23120;23121 | chr2:178719647;178719646;178719645 | chr2:179584374;179584373;179584372 |
N2A | 6705 | 20338;20339;20340 | chr2:178719647;178719646;178719645 | chr2:179584374;179584373;179584372 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | None | None | 0.927 | N | 0.517 | 0.295 | 0.626407189966 | gnomAD-4.0.0 | 1.59141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85879E-06 | 0 | 0 |
P/S | None | None | 0.425 | N | 0.43 | 0.188 | 0.32714864917 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0814 | likely_benign | 0.093 | benign | -1.585 | Destabilizing | 0.425 | N | 0.434 | neutral | N | 0.491402136 | None | None | N |
P/C | 0.4177 | ambiguous | 0.4611 | ambiguous | -0.74 | Destabilizing | 0.995 | D | 0.527 | neutral | None | None | None | None | N |
P/D | 0.3547 | ambiguous | 0.4006 | ambiguous | -1.667 | Destabilizing | 0.704 | D | 0.46 | neutral | None | None | None | None | N |
P/E | 0.2653 | likely_benign | 0.3051 | benign | -1.668 | Destabilizing | 0.329 | N | 0.421 | neutral | None | None | None | None | N |
P/F | 0.3263 | likely_benign | 0.3511 | ambiguous | -1.244 | Destabilizing | 0.007 | N | 0.389 | neutral | None | None | None | None | N |
P/G | 0.2587 | likely_benign | 0.2913 | benign | -1.904 | Destabilizing | 0.828 | D | 0.445 | neutral | None | None | None | None | N |
P/H | 0.1393 | likely_benign | 0.1589 | benign | -1.575 | Destabilizing | 0.927 | D | 0.517 | neutral | N | 0.509681252 | None | None | N |
P/I | 0.2229 | likely_benign | 0.2384 | benign | -0.794 | Destabilizing | 0.543 | D | 0.475 | neutral | None | None | None | None | N |
P/K | 0.2551 | likely_benign | 0.2965 | benign | -1.375 | Destabilizing | 0.329 | N | 0.443 | neutral | None | None | None | None | N |
P/L | 0.0932 | likely_benign | 0.0981 | benign | -0.794 | Destabilizing | 0.001 | N | 0.345 | neutral | N | 0.425390574 | None | None | N |
P/M | 0.2722 | likely_benign | 0.2953 | benign | -0.422 | Destabilizing | 0.893 | D | 0.511 | neutral | None | None | None | None | N |
P/N | 0.2452 | likely_benign | 0.2776 | benign | -1.055 | Destabilizing | 0.828 | D | 0.511 | neutral | None | None | None | None | N |
P/Q | 0.1383 | likely_benign | 0.1615 | benign | -1.235 | Destabilizing | 0.037 | N | 0.197 | neutral | None | None | None | None | N |
P/R | 0.1377 | likely_benign | 0.1557 | benign | -0.826 | Destabilizing | 0.642 | D | 0.503 | neutral | N | 0.482070576 | None | None | N |
P/S | 0.1014 | likely_benign | 0.1143 | benign | -1.493 | Destabilizing | 0.425 | N | 0.43 | neutral | N | 0.44736057 | None | None | N |
P/T | 0.0986 | likely_benign | 0.1098 | benign | -1.401 | Destabilizing | 0.784 | D | 0.454 | neutral | N | 0.472989733 | None | None | N |
P/V | 0.1706 | likely_benign | 0.1873 | benign | -1.025 | Destabilizing | 0.329 | N | 0.437 | neutral | None | None | None | None | N |
P/W | 0.4789 | ambiguous | 0.5033 | ambiguous | -1.501 | Destabilizing | 0.995 | D | 0.533 | neutral | None | None | None | None | N |
P/Y | 0.3013 | likely_benign | 0.3229 | benign | -1.236 | Destabilizing | 0.543 | D | 0.53 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.