Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7951 | 24076;24077;24078 | chr2:178719641;178719640;178719639 | chr2:179584368;179584367;179584366 |
N2AB | 7634 | 23125;23126;23127 | chr2:178719641;178719640;178719639 | chr2:179584368;179584367;179584366 |
N2A | 6707 | 20344;20345;20346 | chr2:178719641;178719640;178719639 | chr2:179584368;179584367;179584366 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.001 | N | 0.3 | 0.133 | 0.247872288689 | gnomAD-4.0.0 | 2.05267E-06 | None | None | None | None | N | None | 2.98811E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.799E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5405 | ambiguous | 0.5531 | ambiguous | -1.818 | Destabilizing | 0.006 | N | 0.481 | neutral | None | None | None | None | N |
A/D | 0.9167 | likely_pathogenic | 0.925 | pathogenic | -3.119 | Highly Destabilizing | 0.497 | N | 0.74 | deleterious | D | 0.535355329 | None | None | N |
A/E | 0.8756 | likely_pathogenic | 0.8827 | pathogenic | -2.993 | Highly Destabilizing | 0.567 | D | 0.739 | prob.delet. | None | None | None | None | N |
A/F | 0.8353 | likely_pathogenic | 0.8146 | pathogenic | -0.902 | Destabilizing | 0.567 | D | 0.732 | prob.delet. | None | None | None | None | N |
A/G | 0.2861 | likely_benign | 0.2936 | benign | -1.511 | Destabilizing | 0.22 | N | 0.568 | neutral | D | 0.541849789 | None | None | N |
A/H | 0.9373 | likely_pathogenic | 0.939 | pathogenic | -1.739 | Destabilizing | 0.968 | D | 0.725 | prob.delet. | None | None | None | None | N |
A/I | 0.3899 | ambiguous | 0.3835 | ambiguous | -0.173 | Destabilizing | 0.06 | N | 0.675 | neutral | None | None | None | None | N |
A/K | 0.9433 | likely_pathogenic | 0.949 | pathogenic | -1.438 | Destabilizing | 0.567 | D | 0.738 | prob.delet. | None | None | None | None | N |
A/L | 0.4133 | ambiguous | 0.392 | ambiguous | -0.173 | Destabilizing | 0.157 | N | 0.565 | neutral | None | None | None | None | N |
A/M | 0.4917 | ambiguous | 0.4646 | ambiguous | -0.53 | Destabilizing | 0.832 | D | 0.719 | prob.delet. | None | None | None | None | N |
A/N | 0.8152 | likely_pathogenic | 0.8198 | pathogenic | -1.804 | Destabilizing | 0.567 | D | 0.753 | deleterious | None | None | None | None | N |
A/P | 0.5235 | ambiguous | 0.5575 | ambiguous | -0.456 | Destabilizing | 0.667 | D | 0.756 | deleterious | N | 0.515605233 | None | None | N |
A/Q | 0.8726 | likely_pathogenic | 0.8766 | pathogenic | -1.761 | Destabilizing | 0.726 | D | 0.727 | prob.delet. | None | None | None | None | N |
A/R | 0.8893 | likely_pathogenic | 0.8964 | pathogenic | -1.314 | Destabilizing | 0.567 | D | 0.755 | deleterious | None | None | None | None | N |
A/S | 0.1611 | likely_benign | 0.1575 | benign | -2.07 | Highly Destabilizing | 0.124 | N | 0.535 | neutral | N | 0.501589128 | None | None | N |
A/T | 0.1215 | likely_benign | 0.1088 | benign | -1.845 | Destabilizing | 0.001 | N | 0.3 | neutral | N | 0.489850272 | None | None | N |
A/V | 0.1521 | likely_benign | 0.1539 | benign | -0.456 | Destabilizing | 0.001 | N | 0.424 | neutral | N | 0.43783701 | None | None | N |
A/W | 0.9701 | likely_pathogenic | 0.967 | pathogenic | -1.585 | Destabilizing | 0.968 | D | 0.753 | deleterious | None | None | None | None | N |
A/Y | 0.9328 | likely_pathogenic | 0.9293 | pathogenic | -1.109 | Destabilizing | 0.726 | D | 0.744 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.