Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7956 | 24091;24092;24093 | chr2:178719626;178719625;178719624 | chr2:179584353;179584352;179584351 |
N2AB | 7639 | 23140;23141;23142 | chr2:178719626;178719625;178719624 | chr2:179584353;179584352;179584351 |
N2A | 6712 | 20359;20360;20361 | chr2:178719626;178719625;178719624 | chr2:179584353;179584352;179584351 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | rs1405929725 | None | 0.642 | N | 0.549 | 0.28 | 0.561599553422 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/I | rs1405929725 | None | 0.642 | N | 0.549 | 0.28 | 0.561599553422 | gnomAD-4.0.0 | 6.57393E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47024E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2292 | likely_benign | 0.2257 | benign | -0.475 | Destabilizing | 0.176 | N | 0.257 | neutral | None | None | None | None | N |
K/C | 0.6635 | likely_pathogenic | 0.6798 | pathogenic | -0.276 | Destabilizing | 0.995 | D | 0.435 | neutral | None | None | None | None | N |
K/D | 0.476 | ambiguous | 0.4725 | ambiguous | -0.124 | Destabilizing | 0.329 | N | 0.401 | neutral | None | None | None | None | N |
K/E | 0.1065 | likely_benign | 0.1076 | benign | -0.035 | Destabilizing | 0.01 | N | 0.158 | neutral | N | 0.422291554 | None | None | N |
K/F | 0.7753 | likely_pathogenic | 0.7976 | pathogenic | -0.209 | Destabilizing | 0.981 | D | 0.469 | neutral | None | None | None | None | N |
K/G | 0.3084 | likely_benign | 0.3247 | benign | -0.83 | Destabilizing | 0.329 | N | 0.345 | neutral | None | None | None | None | N |
K/H | 0.3403 | ambiguous | 0.3396 | benign | -1.279 | Destabilizing | 0.944 | D | 0.495 | neutral | None | None | None | None | N |
K/I | 0.3543 | ambiguous | 0.3676 | ambiguous | 0.438 | Stabilizing | 0.642 | D | 0.549 | neutral | N | 0.485652386 | None | None | N |
K/L | 0.3781 | ambiguous | 0.3962 | ambiguous | 0.438 | Stabilizing | 0.495 | N | 0.377 | neutral | None | None | None | None | N |
K/M | 0.198 | likely_benign | 0.2036 | benign | 0.408 | Stabilizing | 0.981 | D | 0.497 | neutral | None | None | None | None | N |
K/N | 0.3428 | ambiguous | 0.3441 | ambiguous | -0.245 | Destabilizing | 0.425 | N | 0.387 | neutral | N | 0.477590263 | None | None | N |
K/P | 0.7987 | likely_pathogenic | 0.8149 | pathogenic | 0.164 | Stabilizing | 0.828 | D | 0.481 | neutral | None | None | None | None | N |
K/Q | 0.1151 | likely_benign | 0.1129 | benign | -0.336 | Destabilizing | 0.065 | N | 0.188 | neutral | N | 0.448691508 | None | None | N |
K/R | 0.0781 | likely_benign | 0.0771 | benign | -0.606 | Destabilizing | 0.002 | N | 0.127 | neutral | N | 0.472837805 | None | None | N |
K/S | 0.2584 | likely_benign | 0.255 | benign | -0.841 | Destabilizing | 0.013 | N | 0.139 | neutral | None | None | None | None | N |
K/T | 0.1196 | likely_benign | 0.1177 | benign | -0.554 | Destabilizing | 0.01 | N | 0.196 | neutral | N | 0.409999834 | None | None | N |
K/V | 0.3135 | likely_benign | 0.3187 | benign | 0.164 | Stabilizing | 0.704 | D | 0.465 | neutral | None | None | None | None | N |
K/W | 0.7952 | likely_pathogenic | 0.8059 | pathogenic | -0.112 | Destabilizing | 0.995 | D | 0.453 | neutral | None | None | None | None | N |
K/Y | 0.6156 | likely_pathogenic | 0.6327 | pathogenic | 0.164 | Stabilizing | 0.981 | D | 0.511 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.