Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7960 | 24103;24104;24105 | chr2:178719614;178719613;178719612 | chr2:179584341;179584340;179584339 |
N2AB | 7643 | 23152;23153;23154 | chr2:178719614;178719613;178719612 | chr2:179584341;179584340;179584339 |
N2A | 6716 | 20371;20372;20373 | chr2:178719614;178719613;178719612 | chr2:179584341;179584340;179584339 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs369302142 | 0.177 | 0.055 | N | 0.555 | 0.175 | None | gnomAD-2.1.1 | 3.62E-05 | None | None | None | None | N | None | 0 | 8.7E-05 | None | 1.99164E-04 | 0 | None | 0 | None | 0 | 2.67E-05 | 1.66223E-04 |
S/N | rs369302142 | 0.177 | 0.055 | N | 0.555 | 0.175 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 2.88351E-04 | 0 | None | 0 | 0 | 0 | 0 | 4.78927E-04 |
S/N | rs369302142 | 0.177 | 0.055 | N | 0.555 | 0.175 | None | gnomAD-4.0.0 | 1.7356E-05 | None | None | None | None | N | None | 0 | 1.00037E-04 | None | 3.38043E-04 | 0 | None | 0 | 0 | 6.78252E-06 | 0 | 6.40718E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1073 | likely_benign | 0.1103 | benign | -0.698 | Destabilizing | 0.007 | N | 0.407 | neutral | None | None | None | None | N |
S/C | 0.1255 | likely_benign | 0.1394 | benign | -0.132 | Destabilizing | 0.612 | D | 0.629 | neutral | N | 0.472012397 | None | None | N |
S/D | 0.5271 | ambiguous | 0.5147 | ambiguous | -0.895 | Destabilizing | 0.072 | N | 0.544 | neutral | None | None | None | None | N |
S/E | 0.611 | likely_pathogenic | 0.6187 | pathogenic | -0.654 | Destabilizing | 0.072 | N | 0.55 | neutral | None | None | None | None | N |
S/F | 0.2203 | likely_benign | 0.2418 | benign | -0.618 | Destabilizing | 0.356 | N | 0.612 | neutral | None | None | None | None | N |
S/G | 0.1305 | likely_benign | 0.1326 | benign | -1.122 | Destabilizing | None | N | 0.293 | neutral | N | 0.471758907 | None | None | N |
S/H | 0.3239 | likely_benign | 0.3278 | benign | -1.326 | Destabilizing | 0.628 | D | 0.629 | neutral | None | None | None | None | N |
S/I | 0.1951 | likely_benign | 0.2024 | benign | 0.406 | Stabilizing | 0.001 | N | 0.603 | neutral | N | 0.486203307 | None | None | N |
S/K | 0.7232 | likely_pathogenic | 0.7362 | pathogenic | 0.608 | Stabilizing | 0.072 | N | 0.547 | neutral | None | None | None | None | N |
S/L | 0.1254 | likely_benign | 0.1335 | benign | 0.406 | Stabilizing | 0.016 | N | 0.601 | neutral | None | None | None | None | N |
S/M | 0.2425 | likely_benign | 0.2489 | benign | 0.215 | Stabilizing | 0.356 | N | 0.625 | neutral | None | None | None | None | N |
S/N | 0.182 | likely_benign | 0.1752 | benign | -0.21 | Destabilizing | 0.055 | N | 0.555 | neutral | N | 0.471758907 | None | None | N |
S/P | 0.963 | likely_pathogenic | 0.9608 | pathogenic | 0.072 | Stabilizing | 0.356 | N | 0.63 | neutral | None | None | None | None | N |
S/Q | 0.5335 | ambiguous | 0.5446 | ambiguous | 0.109 | Stabilizing | 0.356 | N | 0.585 | neutral | None | None | None | None | N |
S/R | 0.5543 | ambiguous | 0.5477 | ambiguous | 0.017 | Stabilizing | 0.171 | N | 0.631 | neutral | N | 0.482450926 | None | None | N |
S/T | 0.0699 | likely_benign | 0.0753 | benign | 0.089 | Stabilizing | None | N | 0.242 | neutral | N | 0.372395012 | None | None | N |
S/V | 0.2167 | likely_benign | 0.2287 | benign | 0.072 | Stabilizing | 0.001 | N | 0.527 | neutral | None | None | None | None | N |
S/W | 0.3737 | ambiguous | 0.386 | ambiguous | -0.833 | Destabilizing | 0.864 | D | 0.713 | prob.delet. | None | None | None | None | N |
S/Y | 0.1883 | likely_benign | 0.1978 | benign | -0.331 | Destabilizing | 0.356 | N | 0.611 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.