Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7975 | 24148;24149;24150 | chr2:178719569;178719568;178719567 | chr2:179584296;179584295;179584294 |
N2AB | 7658 | 23197;23198;23199 | chr2:178719569;178719568;178719567 | chr2:179584296;179584295;179584294 |
N2A | 6731 | 20416;20417;20418 | chr2:178719569;178719568;178719567 | chr2:179584296;179584295;179584294 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs2078029519 | None | 0.999 | N | 0.663 | 0.46 | 0.77112915265 | gnomAD-4.0.0 | 2.06075E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80574E-06 | 0 | 1.66312E-05 |
S/F | None | None | 0.996 | N | 0.688 | 0.421 | 0.823965795647 | gnomAD-4.0.0 | 6.86917E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02869E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0785 | likely_benign | 0.0803 | benign | -0.606 | Destabilizing | 0.826 | D | 0.475 | neutral | N | 0.493988123 | None | None | N |
S/C | 0.1734 | likely_benign | 0.1935 | benign | -0.373 | Destabilizing | 0.999 | D | 0.663 | neutral | N | 0.517411977 | None | None | N |
S/D | 0.3425 | ambiguous | 0.3275 | benign | -0.15 | Destabilizing | 0.884 | D | 0.616 | neutral | None | None | None | None | N |
S/E | 0.4751 | ambiguous | 0.4513 | ambiguous | -0.102 | Destabilizing | 0.863 | D | 0.577 | neutral | None | None | None | None | N |
S/F | 0.1908 | likely_benign | 0.2066 | benign | -0.587 | Destabilizing | 0.996 | D | 0.688 | prob.neutral | N | 0.489899973 | None | None | N |
S/G | 0.1485 | likely_benign | 0.1427 | benign | -0.914 | Destabilizing | 0.863 | D | 0.58 | neutral | None | None | None | None | N |
S/H | 0.3709 | ambiguous | 0.3709 | ambiguous | -1.372 | Destabilizing | 0.991 | D | 0.687 | prob.neutral | None | None | None | None | N |
S/I | 0.2037 | likely_benign | 0.2205 | benign | 0.119 | Stabilizing | 0.982 | D | 0.711 | prob.delet. | None | None | None | None | N |
S/K | 0.6734 | likely_pathogenic | 0.6699 | pathogenic | -0.564 | Destabilizing | 0.17 | N | 0.265 | neutral | None | None | None | None | N |
S/L | 0.0997 | likely_benign | 0.1099 | benign | 0.119 | Stabilizing | 0.939 | D | 0.658 | neutral | None | None | None | None | N |
S/M | 0.2053 | likely_benign | 0.2212 | benign | 0.197 | Stabilizing | 0.997 | D | 0.677 | prob.neutral | None | None | None | None | N |
S/N | 0.1546 | likely_benign | 0.1527 | benign | -0.63 | Destabilizing | 0.17 | N | 0.269 | neutral | None | None | None | None | N |
S/P | 0.2095 | likely_benign | 0.1745 | benign | -0.087 | Destabilizing | 0.996 | D | 0.725 | prob.delet. | D | 0.523652948 | None | None | N |
S/Q | 0.5128 | ambiguous | 0.5175 | ambiguous | -0.635 | Destabilizing | 0.939 | D | 0.666 | neutral | None | None | None | None | N |
S/R | 0.5821 | likely_pathogenic | 0.5718 | pathogenic | -0.642 | Destabilizing | 0.046 | N | 0.491 | neutral | None | None | None | None | N |
S/T | 0.091 | likely_benign | 0.0943 | benign | -0.574 | Destabilizing | 0.134 | N | 0.251 | neutral | N | 0.431009825 | None | None | N |
S/V | 0.1961 | likely_benign | 0.2105 | benign | -0.087 | Destabilizing | 0.939 | D | 0.673 | neutral | None | None | None | None | N |
S/W | 0.3158 | likely_benign | 0.3222 | benign | -0.644 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
S/Y | 0.1787 | likely_benign | 0.1861 | benign | -0.333 | Destabilizing | 0.996 | D | 0.687 | prob.neutral | N | 0.49550906 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.