Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8006 | 24241;24242;24243 | chr2:178719374;178719373;178719372 | chr2:179584101;179584100;179584099 |
N2AB | 7689 | 23290;23291;23292 | chr2:178719374;178719373;178719372 | chr2:179584101;179584100;179584099 |
N2A | 6762 | 20509;20510;20511 | chr2:178719374;178719373;178719372 | chr2:179584101;179584100;179584099 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs764282358 | -1.784 | 1.0 | D | 0.92 | 0.613 | 0.795667397281 | gnomAD-2.1.1 | 4.02E-06 | None | None | disulfide | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
C/Y | rs764282358 | -1.784 | 1.0 | D | 0.92 | 0.613 | 0.795667397281 | gnomAD-4.0.0 | 8.89474E-06 | None | None | disulfide | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.16933E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.8144 | likely_pathogenic | 0.8919 | pathogenic | -1.717 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | disulfide | None | N |
C/D | 0.996 | likely_pathogenic | 0.9981 | pathogenic | -1.81 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | disulfide | None | N |
C/E | 0.9979 | likely_pathogenic | 0.999 | pathogenic | -1.583 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | disulfide | None | N |
C/F | 0.8556 | likely_pathogenic | 0.9186 | pathogenic | -1.053 | Destabilizing | 1.0 | D | 0.908 | deleterious | D | 0.549735103 | disulfide | None | N |
C/G | 0.5341 | ambiguous | 0.7093 | pathogenic | -2.052 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | D | 0.523237057 | disulfide | None | N |
C/H | 0.9929 | likely_pathogenic | 0.9965 | pathogenic | -2.253 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | disulfide | None | N |
C/I | 0.8581 | likely_pathogenic | 0.9305 | pathogenic | -0.807 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | disulfide | None | N |
C/K | 0.9989 | likely_pathogenic | 0.9994 | pathogenic | -1.532 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | disulfide | None | N |
C/L | 0.8446 | likely_pathogenic | 0.9195 | pathogenic | -0.807 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | disulfide | None | N |
C/M | 0.9176 | likely_pathogenic | 0.9587 | pathogenic | -0.268 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | disulfide | None | N |
C/N | 0.9794 | likely_pathogenic | 0.9907 | pathogenic | -2.063 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | disulfide | None | N |
C/P | 0.998 | likely_pathogenic | 0.999 | pathogenic | -1.09 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | disulfide | None | N |
C/Q | 0.995 | likely_pathogenic | 0.9978 | pathogenic | -1.611 | Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | disulfide | None | N |
C/R | 0.992 | likely_pathogenic | 0.9955 | pathogenic | -1.829 | Destabilizing | 1.0 | D | 0.919 | deleterious | D | 0.549988593 | disulfide | None | N |
C/S | 0.8204 | likely_pathogenic | 0.9216 | pathogenic | -2.357 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.527022492 | disulfide | None | N |
C/T | 0.8739 | likely_pathogenic | 0.9487 | pathogenic | -1.965 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | disulfide | None | N |
C/V | 0.7394 | likely_pathogenic | 0.8444 | pathogenic | -1.09 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | disulfide | None | N |
C/W | 0.9822 | likely_pathogenic | 0.9914 | pathogenic | -1.5 | Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.561344898 | disulfide | None | N |
C/Y | 0.9456 | likely_pathogenic | 0.971 | pathogenic | -1.292 | Destabilizing | 1.0 | D | 0.92 | deleterious | D | 0.549735103 | disulfide | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.