Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8014 | 24265;24266;24267 | chr2:178719350;178719349;178719348 | chr2:179584077;179584076;179584075 |
N2AB | 7697 | 23314;23315;23316 | chr2:178719350;178719349;178719348 | chr2:179584077;179584076;179584075 |
N2A | 6770 | 20533;20534;20535 | chr2:178719350;178719349;178719348 | chr2:179584077;179584076;179584075 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1415104830 | None | 0.896 | D | 0.687 | 0.374 | 0.733027900626 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs1415104830 | None | 0.896 | D | 0.687 | 0.374 | 0.733027900626 | gnomAD-4.0.0 | 2.47888E-06 | None | None | None | None | I | None | 4.0062E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47636E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7994 | likely_pathogenic | 0.8145 | pathogenic | -2.019 | Highly Destabilizing | 0.919 | D | 0.59 | neutral | None | None | None | None | I |
I/C | 0.9464 | likely_pathogenic | 0.9463 | pathogenic | -1.386 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | I |
I/D | 0.9876 | likely_pathogenic | 0.9901 | pathogenic | -1.282 | Destabilizing | 0.996 | D | 0.755 | deleterious | None | None | None | None | I |
I/E | 0.9759 | likely_pathogenic | 0.9805 | pathogenic | -1.206 | Destabilizing | 0.988 | D | 0.746 | deleterious | None | None | None | None | I |
I/F | 0.3772 | ambiguous | 0.384 | ambiguous | -1.344 | Destabilizing | 0.026 | N | 0.421 | neutral | D | 0.534712983 | None | None | I |
I/G | 0.9687 | likely_pathogenic | 0.9727 | pathogenic | -2.425 | Highly Destabilizing | 0.988 | D | 0.74 | deleterious | None | None | None | None | I |
I/H | 0.959 | likely_pathogenic | 0.9629 | pathogenic | -1.619 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | I |
I/K | 0.9429 | likely_pathogenic | 0.95 | pathogenic | -1.351 | Destabilizing | 0.976 | D | 0.741 | deleterious | None | None | None | None | I |
I/L | 0.1727 | likely_benign | 0.1676 | benign | -0.937 | Destabilizing | 0.211 | N | 0.435 | neutral | N | 0.471160149 | None | None | I |
I/M | 0.2128 | likely_benign | 0.2006 | benign | -0.816 | Destabilizing | 0.437 | N | 0.461 | neutral | D | 0.522053117 | None | None | I |
I/N | 0.8847 | likely_pathogenic | 0.9011 | pathogenic | -1.286 | Destabilizing | 0.995 | D | 0.759 | deleterious | N | 0.520041642 | None | None | I |
I/P | 0.8922 | likely_pathogenic | 0.9277 | pathogenic | -1.269 | Destabilizing | 0.996 | D | 0.761 | deleterious | None | None | None | None | I |
I/Q | 0.9404 | likely_pathogenic | 0.9473 | pathogenic | -1.364 | Destabilizing | 0.988 | D | 0.758 | deleterious | None | None | None | None | I |
I/R | 0.907 | likely_pathogenic | 0.9175 | pathogenic | -0.861 | Destabilizing | 0.988 | D | 0.76 | deleterious | None | None | None | None | I |
I/S | 0.8619 | likely_pathogenic | 0.8757 | pathogenic | -2.033 | Highly Destabilizing | 0.984 | D | 0.699 | prob.neutral | N | 0.483326153 | None | None | I |
I/T | 0.8568 | likely_pathogenic | 0.8803 | pathogenic | -1.821 | Destabilizing | 0.896 | D | 0.687 | prob.neutral | D | 0.527979011 | None | None | I |
I/V | 0.1055 | likely_benign | 0.1043 | benign | -1.269 | Destabilizing | 0.437 | N | 0.478 | neutral | N | 0.515703147 | None | None | I |
I/W | 0.9692 | likely_pathogenic | 0.9696 | pathogenic | -1.449 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | I |
I/Y | 0.8624 | likely_pathogenic | 0.8612 | pathogenic | -1.212 | Destabilizing | 0.952 | D | 0.699 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.