Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8031 | 24316;24317;24318 | chr2:178719299;178719298;178719297 | chr2:179584026;179584025;179584024 |
N2AB | 7714 | 23365;23366;23367 | chr2:178719299;178719298;178719297 | chr2:179584026;179584025;179584024 |
N2A | 6787 | 20584;20585;20586 | chr2:178719299;178719298;178719297 | chr2:179584026;179584025;179584024 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs2077976693 | None | None | N | 0.34 | 0.234 | 0.414798848334 | gnomAD-4.0.0 | 1.3684E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51902E-05 | None | 0 | 0 | 8.9948E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.2489 | likely_benign | 0.2973 | benign | -1.374 | Destabilizing | 0.048 | N | 0.338 | neutral | None | None | None | None | N |
C/D | 0.3795 | ambiguous | 0.4458 | ambiguous | -0.53 | Destabilizing | 0.364 | N | 0.616 | neutral | None | None | None | None | N |
C/E | 0.4274 | ambiguous | 0.504 | ambiguous | -0.452 | Destabilizing | 0.104 | N | 0.581 | neutral | None | None | None | None | N |
C/F | 0.0744 | likely_benign | 0.0824 | benign | -1.168 | Destabilizing | 0.042 | N | 0.531 | neutral | N | 0.403724436 | None | None | N |
C/G | 0.1131 | likely_benign | 0.1362 | benign | -1.637 | Destabilizing | 0.151 | N | 0.559 | neutral | N | 0.450075588 | None | None | N |
C/H | 0.133 | likely_benign | 0.1527 | benign | -1.988 | Destabilizing | None | N | 0.439 | neutral | None | None | None | None | N |
C/I | 0.22 | likely_benign | 0.2488 | benign | -0.725 | Destabilizing | 0.22 | N | 0.576 | neutral | None | None | None | None | N |
C/K | 0.3379 | likely_benign | 0.3979 | ambiguous | -0.587 | Destabilizing | 0.22 | N | 0.605 | neutral | None | None | None | None | N |
C/L | 0.2106 | likely_benign | 0.2381 | benign | -0.725 | Destabilizing | 0.025 | N | 0.439 | neutral | None | None | None | None | N |
C/M | 0.3866 | ambiguous | 0.4346 | ambiguous | -0.118 | Destabilizing | 0.859 | D | 0.642 | neutral | None | None | None | None | N |
C/N | 0.2176 | likely_benign | 0.2603 | benign | -0.586 | Destabilizing | 0.22 | N | 0.605 | neutral | None | None | None | None | N |
C/P | 0.7043 | likely_pathogenic | 0.7858 | pathogenic | -0.915 | Destabilizing | 0.635 | D | 0.675 | neutral | None | None | None | None | N |
C/Q | 0.2359 | likely_benign | 0.276 | benign | -0.586 | Destabilizing | 0.364 | N | 0.655 | neutral | None | None | None | None | N |
C/R | 0.1314 | likely_benign | 0.1581 | benign | -0.592 | Destabilizing | 0.175 | N | 0.631 | neutral | N | 0.451595741 | None | None | N |
C/S | 0.1577 | likely_benign | 0.1872 | benign | -1.001 | Destabilizing | 0.081 | N | 0.513 | neutral | N | 0.461658019 | None | None | N |
C/T | 0.2564 | likely_benign | 0.298 | benign | -0.753 | Destabilizing | 0.191 | N | 0.536 | neutral | None | None | None | None | N |
C/V | 0.2203 | likely_benign | 0.2432 | benign | -0.915 | Destabilizing | 0.104 | N | 0.504 | neutral | None | None | None | None | N |
C/W | 0.1688 | likely_benign | 0.1764 | benign | -1.231 | Destabilizing | 0.602 | D | 0.637 | neutral | N | 0.475550036 | None | None | N |
C/Y | 0.0594 | likely_benign | 0.0644 | benign | -1.082 | Destabilizing | None | N | 0.34 | neutral | N | 0.326533089 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.