Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8041 | 24346;24347;24348 | chr2:178719269;178719268;178719267 | chr2:179583996;179583995;179583994 |
N2AB | 7724 | 23395;23396;23397 | chr2:178719269;178719268;178719267 | chr2:179583996;179583995;179583994 |
N2A | 6797 | 20614;20615;20616 | chr2:178719269;178719268;178719267 | chr2:179583996;179583995;179583994 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.002 | N | 0.189 | 0.241 | 0.209622950755 | gnomAD-4.0.0 | 6.84205E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9948E-07 | 0 | 0 |
T/S | None | None | 0.065 | N | 0.254 | 0.169 | 0.166414681773 | gnomAD-4.0.0 | 6.84205E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9948E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0751 | likely_benign | 0.0782 | benign | -1.098 | Destabilizing | 0.002 | N | 0.189 | neutral | N | 0.510705546 | None | None | N |
T/C | 0.3317 | likely_benign | 0.3181 | benign | -0.944 | Destabilizing | 0.985 | D | 0.552 | neutral | None | None | None | None | N |
T/D | 0.4143 | ambiguous | 0.4083 | ambiguous | -1.856 | Destabilizing | 0.704 | D | 0.506 | neutral | None | None | None | None | N |
T/E | 0.2898 | likely_benign | 0.2829 | benign | -1.683 | Destabilizing | 0.704 | D | 0.491 | neutral | None | None | None | None | N |
T/F | 0.1312 | likely_benign | 0.1364 | benign | -0.868 | Destabilizing | 0.893 | D | 0.595 | neutral | None | None | None | None | N |
T/G | 0.2288 | likely_benign | 0.2392 | benign | -1.481 | Destabilizing | 0.329 | N | 0.497 | neutral | None | None | None | None | N |
T/H | 0.163 | likely_benign | 0.1633 | benign | -1.72 | Destabilizing | 0.995 | D | 0.606 | neutral | None | None | None | None | N |
T/I | 0.1058 | likely_benign | 0.1051 | benign | -0.108 | Destabilizing | 0.473 | N | 0.507 | neutral | N | 0.514978003 | None | None | N |
T/K | 0.1453 | likely_benign | 0.1375 | benign | -0.709 | Destabilizing | 0.704 | D | 0.494 | neutral | None | None | None | None | N |
T/L | 0.073 | likely_benign | 0.075 | benign | -0.108 | Destabilizing | 0.003 | N | 0.307 | neutral | None | None | None | None | N |
T/M | 0.0771 | likely_benign | 0.081 | benign | -0.068 | Destabilizing | 0.893 | D | 0.543 | neutral | None | None | None | None | N |
T/N | 0.1236 | likely_benign | 0.1216 | benign | -1.393 | Destabilizing | 0.642 | D | 0.515 | neutral | D | 0.536545353 | None | None | N |
T/P | 0.4127 | ambiguous | 0.4199 | ambiguous | -0.407 | Destabilizing | 0.006 | N | 0.408 | neutral | D | 0.525631638 | None | None | N |
T/Q | 0.173 | likely_benign | 0.1729 | benign | -1.232 | Destabilizing | 0.944 | D | 0.553 | neutral | None | None | None | None | N |
T/R | 0.1014 | likely_benign | 0.094 | benign | -0.853 | Destabilizing | 0.944 | D | 0.548 | neutral | None | None | None | None | N |
T/S | 0.0885 | likely_benign | 0.091 | benign | -1.506 | Destabilizing | 0.065 | N | 0.254 | neutral | N | 0.456812346 | None | None | N |
T/V | 0.0942 | likely_benign | 0.0977 | benign | -0.407 | Destabilizing | 0.329 | N | 0.405 | neutral | None | None | None | None | N |
T/W | 0.4479 | ambiguous | 0.4445 | ambiguous | -1.075 | Destabilizing | 0.995 | D | 0.646 | neutral | None | None | None | None | N |
T/Y | 0.1741 | likely_benign | 0.1786 | benign | -0.678 | Destabilizing | 0.981 | D | 0.582 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.