Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8043 | 24352;24353;24354 | chr2:178719263;178719262;178719261 | chr2:179583990;179583989;179583988 |
N2AB | 7726 | 23401;23402;23403 | chr2:178719263;178719262;178719261 | chr2:179583990;179583989;179583988 |
N2A | 6799 | 20620;20621;20622 | chr2:178719263;178719262;178719261 | chr2:179583990;179583989;179583988 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1462695230 | -0.838 | None | N | 0.244 | 0.093 | 0.0986583533028 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/S | rs1462695230 | -0.838 | None | N | 0.244 | 0.093 | 0.0986583533028 | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1389 | likely_benign | 0.142 | benign | -0.825 | Destabilizing | 0.004 | N | 0.451 | neutral | None | None | None | None | N |
N/C | 0.2069 | likely_benign | 0.2148 | benign | -0.341 | Destabilizing | 0.245 | N | 0.555 | neutral | None | None | None | None | N |
N/D | 0.118 | likely_benign | 0.1217 | benign | -1.462 | Destabilizing | 0.007 | N | 0.456 | neutral | N | 0.478704984 | None | None | N |
N/E | 0.1924 | likely_benign | 0.1855 | benign | -1.372 | Destabilizing | 0.009 | N | 0.412 | neutral | None | None | None | None | N |
N/F | 0.2827 | likely_benign | 0.2951 | benign | -0.899 | Destabilizing | 0.044 | N | 0.618 | neutral | None | None | None | None | N |
N/G | 0.2128 | likely_benign | 0.2175 | benign | -1.113 | Destabilizing | 0.004 | N | 0.398 | neutral | None | None | None | None | N |
N/H | 0.0612 | likely_benign | 0.0619 | benign | -0.923 | Destabilizing | None | N | 0.29 | neutral | N | 0.443957692 | None | None | N |
N/I | 0.1237 | likely_benign | 0.1244 | benign | -0.108 | Destabilizing | None | N | 0.491 | neutral | N | 0.409978405 | None | None | N |
N/K | 0.1332 | likely_benign | 0.1141 | benign | -0.194 | Destabilizing | None | N | 0.229 | neutral | N | 0.407804891 | None | None | N |
N/L | 0.1322 | likely_benign | 0.131 | benign | -0.108 | Destabilizing | 0.004 | N | 0.457 | neutral | None | None | None | None | N |
N/M | 0.2011 | likely_benign | 0.1964 | benign | 0.431 | Stabilizing | 0.245 | N | 0.535 | neutral | None | None | None | None | N |
N/P | 0.6233 | likely_pathogenic | 0.5767 | pathogenic | -0.319 | Destabilizing | 0.044 | N | 0.571 | neutral | None | None | None | None | N |
N/Q | 0.1504 | likely_benign | 0.1439 | benign | -1.154 | Destabilizing | 0.044 | N | 0.485 | neutral | None | None | None | None | N |
N/R | 0.1366 | likely_benign | 0.1242 | benign | -0.054 | Destabilizing | None | N | 0.283 | neutral | None | None | None | None | N |
N/S | 0.0689 | likely_benign | 0.0711 | benign | -0.933 | Destabilizing | None | N | 0.244 | neutral | N | 0.44999823 | None | None | N |
N/T | 0.0787 | likely_benign | 0.076 | benign | -0.672 | Destabilizing | None | N | 0.229 | neutral | N | 0.383847809 | None | None | N |
N/V | 0.1418 | likely_benign | 0.141 | benign | -0.319 | Destabilizing | 0.009 | N | 0.459 | neutral | None | None | None | None | N |
N/W | 0.5221 | ambiguous | 0.522 | ambiguous | -0.709 | Destabilizing | 0.788 | D | 0.582 | neutral | None | None | None | None | N |
N/Y | 0.0959 | likely_benign | 0.0975 | benign | -0.4 | Destabilizing | 0.017 | N | 0.569 | neutral | N | 0.490999491 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.