Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8088 | 24487;24488;24489 | chr2:178718938;178718937;178718936 | chr2:179583665;179583664;179583663 |
N2AB | 7771 | 23536;23537;23538 | chr2:178718938;178718937;178718936 | chr2:179583665;179583664;179583663 |
N2A | 6844 | 20755;20756;20757 | chr2:178718938;178718937;178718936 | chr2:179583665;179583664;179583663 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.669 | N | 0.492 | 0.393 | 0.501371821861 | gnomAD-4.0.0 | 6.85347E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.004E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1633 | likely_benign | 0.1807 | benign | -0.465 | Destabilizing | 0.051 | N | 0.245 | neutral | N | 0.521746472 | None | None | I |
E/C | 0.8792 | likely_pathogenic | 0.9042 | pathogenic | -0.338 | Destabilizing | 0.998 | D | 0.471 | neutral | None | None | None | None | I |
E/D | 0.1429 | likely_benign | 0.1618 | benign | -0.475 | Destabilizing | 0.012 | N | 0.237 | neutral | N | 0.503758144 | None | None | I |
E/F | 0.7671 | likely_pathogenic | 0.8118 | pathogenic | 0.126 | Stabilizing | 0.974 | D | 0.48 | neutral | None | None | None | None | I |
E/G | 0.2786 | likely_benign | 0.2963 | benign | -0.738 | Destabilizing | 0.669 | D | 0.492 | neutral | N | 0.514360557 | None | None | I |
E/H | 0.4935 | ambiguous | 0.5654 | pathogenic | 0.421 | Stabilizing | 0.998 | D | 0.457 | neutral | None | None | None | None | I |
E/I | 0.3829 | ambiguous | 0.4527 | ambiguous | 0.251 | Stabilizing | 0.904 | D | 0.477 | neutral | None | None | None | None | I |
E/K | 0.1921 | likely_benign | 0.2311 | benign | 0.259 | Stabilizing | 0.801 | D | 0.523 | neutral | N | 0.485074127 | None | None | I |
E/L | 0.4306 | ambiguous | 0.5055 | ambiguous | 0.251 | Stabilizing | 0.728 | D | 0.5 | neutral | None | None | None | None | I |
E/M | 0.4411 | ambiguous | 0.4895 | ambiguous | 0.23 | Stabilizing | 0.993 | D | 0.467 | neutral | None | None | None | None | I |
E/N | 0.2702 | likely_benign | 0.3263 | benign | -0.469 | Destabilizing | 0.728 | D | 0.477 | neutral | None | None | None | None | I |
E/P | 0.7201 | likely_pathogenic | 0.7927 | pathogenic | 0.033 | Stabilizing | 0.974 | D | 0.497 | neutral | None | None | None | None | I |
E/Q | 0.1535 | likely_benign | 0.1791 | benign | -0.349 | Destabilizing | 0.966 | D | 0.491 | neutral | N | 0.511222834 | None | None | I |
E/R | 0.3169 | likely_benign | 0.3726 | ambiguous | 0.624 | Stabilizing | 0.974 | D | 0.479 | neutral | None | None | None | None | I |
E/S | 0.2048 | likely_benign | 0.2374 | benign | -0.609 | Destabilizing | 0.172 | N | 0.261 | neutral | None | None | None | None | I |
E/T | 0.2029 | likely_benign | 0.238 | benign | -0.362 | Destabilizing | 0.728 | D | 0.491 | neutral | None | None | None | None | I |
E/V | 0.2004 | likely_benign | 0.2396 | benign | 0.033 | Stabilizing | 0.111 | N | 0.323 | neutral | N | 0.510297328 | None | None | I |
E/W | 0.9051 | likely_pathogenic | 0.9294 | pathogenic | 0.423 | Stabilizing | 0.998 | D | 0.618 | neutral | None | None | None | None | I |
E/Y | 0.6699 | likely_pathogenic | 0.7293 | pathogenic | 0.412 | Stabilizing | 0.991 | D | 0.487 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.