Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8090 | 24493;24494;24495 | chr2:178718932;178718931;178718930 | chr2:179583659;179583658;179583657 |
N2AB | 7773 | 23542;23543;23544 | chr2:178718932;178718931;178718930 | chr2:179583659;179583658;179583657 |
N2A | 6846 | 20761;20762;20763 | chr2:178718932;178718931;178718930 | chr2:179583659;179583658;179583657 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.989 | N | 0.447 | 0.296 | 0.568036332872 | gnomAD-4.0.0 | 6.85156E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00213E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2991 | likely_benign | 0.2445 | benign | -0.869 | Destabilizing | 0.97 | D | 0.525 | neutral | None | None | None | None | I |
L/C | 0.6997 | likely_pathogenic | 0.561 | ambiguous | -0.709 | Destabilizing | 1.0 | D | 0.542 | neutral | None | None | None | None | I |
L/D | 0.6565 | likely_pathogenic | 0.5914 | pathogenic | -0.537 | Destabilizing | 0.996 | D | 0.649 | neutral | None | None | None | None | I |
L/E | 0.3523 | ambiguous | 0.2982 | benign | -0.595 | Destabilizing | 0.996 | D | 0.65 | neutral | None | None | None | None | I |
L/F | 0.1605 | likely_benign | 0.125 | benign | -0.685 | Destabilizing | 0.989 | D | 0.447 | neutral | N | 0.518066633 | None | None | I |
L/G | 0.5965 | likely_pathogenic | 0.5203 | ambiguous | -1.08 | Destabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | I |
L/H | 0.2842 | likely_benign | 0.2246 | benign | -0.243 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
L/I | 0.1137 | likely_benign | 0.101 | benign | -0.411 | Destabilizing | 0.304 | N | 0.274 | neutral | None | None | None | None | I |
L/K | 0.2879 | likely_benign | 0.2492 | benign | -0.636 | Destabilizing | 0.996 | D | 0.611 | neutral | None | None | None | None | I |
L/M | 0.137 | likely_benign | 0.1219 | benign | -0.505 | Destabilizing | 0.835 | D | 0.439 | neutral | D | 0.533635547 | None | None | I |
L/N | 0.4006 | ambiguous | 0.3386 | benign | -0.479 | Destabilizing | 0.996 | D | 0.649 | neutral | None | None | None | None | I |
L/P | 0.3185 | likely_benign | 0.2769 | benign | -0.531 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | I |
L/Q | 0.1861 | likely_benign | 0.1483 | benign | -0.679 | Destabilizing | 0.996 | D | 0.627 | neutral | None | None | None | None | I |
L/R | 0.2322 | likely_benign | 0.1963 | benign | -0.033 | Destabilizing | 0.996 | D | 0.622 | neutral | None | None | None | None | I |
L/S | 0.2789 | likely_benign | 0.2078 | benign | -0.93 | Destabilizing | 0.977 | D | 0.557 | neutral | N | 0.490119647 | None | None | I |
L/T | 0.2515 | likely_benign | 0.2085 | benign | -0.878 | Destabilizing | 0.503 | D | 0.339 | neutral | None | None | None | None | I |
L/V | 0.122 | likely_benign | 0.1076 | benign | -0.531 | Destabilizing | 0.248 | N | 0.303 | neutral | N | 0.510932046 | None | None | I |
L/W | 0.3433 | ambiguous | 0.269 | benign | -0.72 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.518320122 | None | None | I |
L/Y | 0.3907 | ambiguous | 0.3177 | benign | -0.49 | Destabilizing | 0.999 | D | 0.492 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.