Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8108 | 24547;24548;24549 | chr2:178718878;178718877;178718876 | chr2:179583605;179583604;179583603 |
N2AB | 7791 | 23596;23597;23598 | chr2:178718878;178718877;178718876 | chr2:179583605;179583604;179583603 |
N2A | 6864 | 20815;20816;20817 | chr2:178718878;178718877;178718876 | chr2:179583605;179583604;179583603 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs776437978 | 0.473 | 0.062 | N | 0.447 | 0.129 | None | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 1.94124E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs776437978 | 0.473 | 0.062 | N | 0.447 | 0.129 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs776437978 | 0.473 | 0.062 | N | 0.447 | 0.129 | None | gnomAD-4.0.0 | 4.33856E-06 | None | None | None | None | I | None | 6.67913E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.4768E-07 | 1.09818E-05 | 0 |
K/N | None | None | None | N | 0.225 | 0.138 | 0.207176502487 | gnomAD-4.0.0 | 6.8427E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99504E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2503 | likely_benign | 0.2313 | benign | -0.077 | Destabilizing | 0.035 | N | 0.483 | neutral | None | None | None | None | I |
K/C | 0.6556 | likely_pathogenic | 0.6288 | pathogenic | -0.253 | Destabilizing | 0.824 | D | 0.551 | neutral | None | None | None | None | I |
K/D | 0.3959 | ambiguous | 0.342 | ambiguous | 0.101 | Stabilizing | 0.081 | N | 0.549 | neutral | None | None | None | None | I |
K/E | 0.1168 | likely_benign | 0.1097 | benign | 0.159 | Stabilizing | 0.062 | N | 0.447 | neutral | N | 0.468775992 | None | None | I |
K/F | 0.6482 | likely_pathogenic | 0.6234 | pathogenic | 0.021 | Stabilizing | 0.38 | N | 0.573 | neutral | None | None | None | None | I |
K/G | 0.4173 | ambiguous | 0.3725 | ambiguous | -0.364 | Destabilizing | 0.081 | N | 0.531 | neutral | None | None | None | None | I |
K/H | 0.1969 | likely_benign | 0.1821 | benign | -0.64 | Destabilizing | 0.38 | N | 0.518 | neutral | None | None | None | None | I |
K/I | 0.2564 | likely_benign | 0.2498 | benign | 0.622 | Stabilizing | 0.235 | N | 0.565 | neutral | None | None | None | None | I |
K/L | 0.2696 | likely_benign | 0.2529 | benign | 0.622 | Stabilizing | 0.029 | N | 0.517 | neutral | None | None | None | None | I |
K/M | 0.1809 | likely_benign | 0.1764 | benign | 0.285 | Stabilizing | 0.027 | N | 0.407 | neutral | N | 0.498204859 | None | None | I |
K/N | 0.2595 | likely_benign | 0.2277 | benign | 0.018 | Stabilizing | None | N | 0.225 | neutral | N | 0.493655794 | None | None | I |
K/P | 0.837 | likely_pathogenic | 0.8004 | pathogenic | 0.42 | Stabilizing | 0.555 | D | 0.552 | neutral | None | None | None | None | I |
K/Q | 0.1006 | likely_benign | 0.0956 | benign | -0.068 | Destabilizing | 0.001 | N | 0.228 | neutral | N | 0.469450783 | None | None | I |
K/R | 0.0783 | likely_benign | 0.0777 | benign | -0.266 | Destabilizing | 0.062 | N | 0.455 | neutral | N | 0.503987431 | None | None | I |
K/S | 0.2519 | likely_benign | 0.2169 | benign | -0.499 | Destabilizing | 0.035 | N | 0.422 | neutral | None | None | None | None | I |
K/T | 0.1066 | likely_benign | 0.1016 | benign | -0.264 | Destabilizing | None | N | 0.249 | neutral | N | 0.439725309 | None | None | I |
K/V | 0.2407 | likely_benign | 0.2332 | benign | 0.42 | Stabilizing | 0.081 | N | 0.531 | neutral | None | None | None | None | I |
K/W | 0.661 | likely_pathogenic | 0.6511 | pathogenic | 0.041 | Stabilizing | 0.935 | D | 0.597 | neutral | None | None | None | None | I |
K/Y | 0.5047 | ambiguous | 0.4756 | ambiguous | 0.354 | Stabilizing | 0.555 | D | 0.575 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.