Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8109 | 24550;24551;24552 | chr2:178718875;178718874;178718873 | chr2:179583602;179583601;179583600 |
N2AB | 7792 | 23599;23600;23601 | chr2:178718875;178718874;178718873 | chr2:179583602;179583601;179583600 |
N2A | 6865 | 20818;20819;20820 | chr2:178718875;178718874;178718873 | chr2:179583602;179583601;179583600 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.822 | D | 0.676 | 0.669 | 0.736644243634 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/I | rs2077903400 | None | 0.014 | N | 0.215 | 0.148 | 0.395143324098 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs2077903400 | None | 0.014 | N | 0.215 | 0.148 | 0.395143324098 | gnomAD-4.0.0 | 2.56283E-06 | None | None | None | None | I | None | 3.38455E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4028 | ambiguous | 0.3705 | ambiguous | -1.744 | Destabilizing | 0.822 | D | 0.676 | prob.neutral | D | 0.626322647 | None | None | I |
V/C | 0.893 | likely_pathogenic | 0.875 | pathogenic | -1.08 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | I |
V/D | 0.8982 | likely_pathogenic | 0.8944 | pathogenic | -2.015 | Highly Destabilizing | 0.99 | D | 0.864 | deleterious | D | 0.627331668 | None | None | I |
V/E | 0.7909 | likely_pathogenic | 0.7909 | pathogenic | -1.878 | Destabilizing | 0.993 | D | 0.865 | deleterious | None | None | None | None | I |
V/F | 0.3967 | ambiguous | 0.3735 | ambiguous | -1.042 | Destabilizing | 0.942 | D | 0.791 | deleterious | D | 0.563436387 | None | None | I |
V/G | 0.4392 | ambiguous | 0.4301 | ambiguous | -2.202 | Highly Destabilizing | 0.971 | D | 0.863 | deleterious | D | 0.627331668 | None | None | I |
V/H | 0.9376 | likely_pathogenic | 0.9256 | pathogenic | -1.925 | Destabilizing | 0.998 | D | 0.851 | deleterious | None | None | None | None | I |
V/I | 0.1068 | likely_benign | 0.1077 | benign | -0.514 | Destabilizing | 0.014 | N | 0.215 | neutral | N | 0.496856389 | None | None | I |
V/K | 0.8559 | likely_pathogenic | 0.8498 | pathogenic | -1.579 | Destabilizing | 0.978 | D | 0.867 | deleterious | None | None | None | None | I |
V/L | 0.3773 | ambiguous | 0.3659 | ambiguous | -0.514 | Destabilizing | 0.014 | N | 0.337 | neutral | D | 0.551238274 | None | None | I |
V/M | 0.3006 | likely_benign | 0.2991 | benign | -0.375 | Destabilizing | 0.956 | D | 0.705 | prob.neutral | None | None | None | None | I |
V/N | 0.8273 | likely_pathogenic | 0.818 | pathogenic | -1.605 | Destabilizing | 0.993 | D | 0.863 | deleterious | None | None | None | None | I |
V/P | 0.8842 | likely_pathogenic | 0.8505 | pathogenic | -0.893 | Destabilizing | 0.993 | D | 0.86 | deleterious | None | None | None | None | I |
V/Q | 0.8192 | likely_pathogenic | 0.8114 | pathogenic | -1.57 | Destabilizing | 0.993 | D | 0.867 | deleterious | None | None | None | None | I |
V/R | 0.8328 | likely_pathogenic | 0.8228 | pathogenic | -1.275 | Destabilizing | 0.993 | D | 0.858 | deleterious | None | None | None | None | I |
V/S | 0.6526 | likely_pathogenic | 0.6263 | pathogenic | -2.168 | Highly Destabilizing | 0.978 | D | 0.863 | deleterious | None | None | None | None | I |
V/T | 0.5178 | ambiguous | 0.491 | ambiguous | -1.906 | Destabilizing | 0.86 | D | 0.733 | prob.delet. | None | None | None | None | I |
V/W | 0.9391 | likely_pathogenic | 0.9261 | pathogenic | -1.495 | Destabilizing | 0.998 | D | 0.847 | deleterious | None | None | None | None | I |
V/Y | 0.8272 | likely_pathogenic | 0.7992 | pathogenic | -1.118 | Destabilizing | 0.978 | D | 0.763 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.