Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8120 | 24583;24584;24585 | chr2:178718842;178718841;178718840 | chr2:179583569;179583568;179583567 |
N2AB | 7803 | 23632;23633;23634 | chr2:178718842;178718841;178718840 | chr2:179583569;179583568;179583567 |
N2A | 6876 | 20851;20852;20853 | chr2:178718842;178718841;178718840 | chr2:179583569;179583568;179583567 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.024 | D | 0.364 | 0.223 | 0.52535981233 | gnomAD-4.0.0 | 6.15809E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09546E-06 | 0 | 0 |
P/S | rs745913661 | -0.074 | None | N | 0.117 | 0.119 | 0.0551355673512 | gnomAD-2.1.1 | 4.83E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.69195E-04 | None | 0 | None | 0 | 0 | 0 |
P/S | rs745913661 | -0.074 | None | N | 0.117 | 0.119 | 0.0551355673512 | gnomAD-4.0.0 | 3.2843E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.20968E-03 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0595 | likely_benign | 0.0574 | benign | -0.438 | Destabilizing | None | N | 0.144 | neutral | N | 0.513009559 | None | None | N |
P/C | 0.3062 | likely_benign | 0.3101 | benign | -0.657 | Destabilizing | 0.001 | N | 0.279 | neutral | None | None | None | None | N |
P/D | 0.2705 | likely_benign | 0.2598 | benign | -0.361 | Destabilizing | 0.038 | N | 0.327 | neutral | None | None | None | None | N |
P/E | 0.1687 | likely_benign | 0.1586 | benign | -0.479 | Destabilizing | 0.016 | N | 0.333 | neutral | None | None | None | None | N |
P/F | 0.2676 | likely_benign | 0.2712 | benign | -0.727 | Destabilizing | 0.356 | N | 0.397 | neutral | None | None | None | None | N |
P/G | 0.1642 | likely_benign | 0.1612 | benign | -0.55 | Destabilizing | 0.016 | N | 0.333 | neutral | None | None | None | None | N |
P/H | 0.1247 | likely_benign | 0.1241 | benign | -0.131 | Destabilizing | 0.171 | N | 0.354 | neutral | N | 0.518436808 | None | None | N |
P/I | 0.2083 | likely_benign | 0.2067 | benign | -0.294 | Destabilizing | 0.072 | N | 0.435 | neutral | None | None | None | None | N |
P/K | 0.1616 | likely_benign | 0.1529 | benign | -0.423 | Destabilizing | 0.038 | N | 0.335 | neutral | None | None | None | None | N |
P/L | 0.0909 | likely_benign | 0.0886 | benign | -0.294 | Destabilizing | 0.024 | N | 0.364 | neutral | D | 0.526074857 | None | None | N |
P/M | 0.1921 | likely_benign | 0.1898 | benign | -0.408 | Destabilizing | 0.356 | N | 0.365 | neutral | None | None | None | None | N |
P/N | 0.1933 | likely_benign | 0.1881 | benign | -0.172 | Destabilizing | 0.038 | N | 0.357 | neutral | None | None | None | None | N |
P/Q | 0.1049 | likely_benign | 0.0969 | benign | -0.418 | Destabilizing | None | N | 0.205 | neutral | None | None | None | None | N |
P/R | 0.111 | likely_benign | 0.1087 | benign | 0.093 | Stabilizing | 0.029 | N | 0.379 | neutral | N | 0.484149074 | None | None | N |
P/S | 0.0716 | likely_benign | 0.0695 | benign | -0.501 | Destabilizing | None | N | 0.117 | neutral | N | 0.429505528 | None | None | N |
P/T | 0.0713 | likely_benign | 0.0705 | benign | -0.519 | Destabilizing | 0.001 | N | 0.17 | neutral | N | 0.509411893 | None | None | N |
P/V | 0.1619 | likely_benign | 0.1547 | benign | -0.308 | Destabilizing | 0.072 | N | 0.356 | neutral | None | None | None | None | N |
P/W | 0.3337 | likely_benign | 0.3329 | benign | -0.799 | Destabilizing | 0.864 | D | 0.405 | neutral | None | None | None | None | N |
P/Y | 0.2385 | likely_benign | 0.2375 | benign | -0.5 | Destabilizing | 0.356 | N | 0.399 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.