Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8124 | 24595;24596;24597 | chr2:178718830;178718829;178718828 | chr2:179583557;179583556;179583555 |
N2AB | 7807 | 23644;23645;23646 | chr2:178718830;178718829;178718828 | chr2:179583557;179583556;179583555 |
N2A | 6880 | 20863;20864;20865 | chr2:178718830;178718829;178718828 | chr2:179583557;179583556;179583555 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | rs1577966478 | None | 0.999 | N | 0.735 | 0.604 | 0.854177468779 | gnomAD-4.0.0 | 1.59129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.4108E-04 | 0 | 0 | 0 |
C/Y | rs754319631 | -1.527 | 0.4 | N | 0.429 | 0.317 | 0.651574910104 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
C/Y | rs754319631 | -1.527 | 0.4 | N | 0.429 | 0.317 | 0.651574910104 | gnomAD-4.0.0 | 7.52636E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.89431E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4563 | ambiguous | 0.4674 | ambiguous | -1.796 | Destabilizing | 0.982 | D | 0.577 | neutral | None | None | None | None | N |
C/D | 0.823 | likely_pathogenic | 0.8315 | pathogenic | -0.419 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
C/E | 0.8135 | likely_pathogenic | 0.8269 | pathogenic | -0.264 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | N |
C/F | 0.2167 | likely_benign | 0.2233 | benign | -1.114 | Destabilizing | 0.961 | D | 0.644 | neutral | N | 0.48480145 | None | None | N |
C/G | 0.2306 | likely_benign | 0.2449 | benign | -2.139 | Highly Destabilizing | 0.997 | D | 0.673 | neutral | D | 0.525226708 | None | None | N |
C/H | 0.4325 | ambiguous | 0.4324 | ambiguous | -2.174 | Highly Destabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | N |
C/I | 0.4844 | ambiguous | 0.5023 | ambiguous | -0.894 | Destabilizing | 0.993 | D | 0.626 | neutral | None | None | None | None | N |
C/K | 0.7228 | likely_pathogenic | 0.7337 | pathogenic | -0.879 | Destabilizing | 0.998 | D | 0.678 | prob.neutral | None | None | None | None | N |
C/L | 0.4971 | ambiguous | 0.5136 | ambiguous | -0.894 | Destabilizing | 0.964 | D | 0.609 | neutral | None | None | None | None | N |
C/M | 0.6545 | likely_pathogenic | 0.6773 | pathogenic | 0.009 | Stabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
C/N | 0.6197 | likely_pathogenic | 0.6118 | pathogenic | -1.06 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
C/P | 0.949 | likely_pathogenic | 0.9495 | pathogenic | -1.169 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
C/Q | 0.5513 | ambiguous | 0.5655 | pathogenic | -0.825 | Destabilizing | 0.999 | D | 0.738 | prob.delet. | None | None | None | None | N |
C/R | 0.3004 | likely_benign | 0.3131 | benign | -0.978 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | N | 0.509238535 | None | None | N |
C/S | 0.3203 | likely_benign | 0.3213 | benign | -1.596 | Destabilizing | 0.99 | D | 0.629 | neutral | N | 0.518762095 | None | None | N |
C/T | 0.4677 | ambiguous | 0.4654 | ambiguous | -1.239 | Destabilizing | 0.993 | D | 0.626 | neutral | None | None | None | None | N |
C/V | 0.4186 | ambiguous | 0.4285 | ambiguous | -1.169 | Destabilizing | 0.985 | D | 0.601 | neutral | None | None | None | None | N |
C/W | 0.3787 | ambiguous | 0.4018 | ambiguous | -1.185 | Destabilizing | 1.0 | D | 0.669 | neutral | N | 0.486035178 | None | None | N |
C/Y | 0.251 | likely_benign | 0.2496 | benign | -1.126 | Destabilizing | 0.4 | N | 0.429 | neutral | N | 0.438586371 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.