Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8125 | 24598;24599;24600 | chr2:178718827;178718826;178718825 | chr2:179583554;179583553;179583552 |
N2AB | 7808 | 23647;23648;23649 | chr2:178718827;178718826;178718825 | chr2:179583554;179583553;179583552 |
N2A | 6881 | 20866;20867;20868 | chr2:178718827;178718826;178718825 | chr2:179583554;179583553;179583552 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | None | N | 0.091 | 0.144 | 0.134241683229 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1422 | likely_benign | 0.1549 | benign | -0.982 | Destabilizing | None | N | 0.242 | neutral | None | None | None | None | I |
N/C | 0.2207 | likely_benign | 0.2549 | benign | -0.012 | Destabilizing | 0.824 | D | 0.389 | neutral | None | None | None | None | I |
N/D | 0.1016 | likely_benign | 0.1068 | benign | -0.094 | Destabilizing | 0.062 | N | 0.24 | neutral | D | 0.531192675 | None | None | I |
N/E | 0.2102 | likely_benign | 0.2378 | benign | -0.034 | Destabilizing | 0.081 | N | 0.201 | neutral | None | None | None | None | I |
N/F | 0.2883 | likely_benign | 0.3426 | ambiguous | -0.841 | Destabilizing | 0.555 | D | 0.413 | neutral | None | None | None | None | I |
N/G | 0.2074 | likely_benign | 0.2323 | benign | -1.282 | Destabilizing | 0.035 | N | 0.251 | neutral | None | None | None | None | I |
N/H | 0.0743 | likely_benign | 0.0797 | benign | -0.959 | Destabilizing | 0.484 | N | 0.369 | neutral | N | 0.485652386 | None | None | I |
N/I | 0.1346 | likely_benign | 0.154 | benign | -0.234 | Destabilizing | 0.188 | N | 0.404 | neutral | D | 0.531886108 | None | None | I |
N/K | 0.1527 | likely_benign | 0.1663 | benign | -0.163 | Destabilizing | 0.062 | N | 0.191 | neutral | N | 0.453518538 | None | None | I |
N/L | 0.1504 | likely_benign | 0.1693 | benign | -0.234 | Destabilizing | 0.081 | N | 0.375 | neutral | None | None | None | None | I |
N/M | 0.2011 | likely_benign | 0.2309 | benign | 0.236 | Stabilizing | 0.555 | D | 0.366 | neutral | None | None | None | None | I |
N/P | 0.6848 | likely_pathogenic | 0.7367 | pathogenic | -0.455 | Destabilizing | 0.38 | N | 0.377 | neutral | None | None | None | None | I |
N/Q | 0.1753 | likely_benign | 0.1953 | benign | -0.737 | Destabilizing | 0.38 | N | 0.324 | neutral | None | None | None | None | I |
N/R | 0.1381 | likely_benign | 0.1545 | benign | -0.112 | Destabilizing | 0.149 | N | 0.277 | neutral | None | None | None | None | I |
N/S | 0.0693 | likely_benign | 0.073 | benign | -0.76 | Destabilizing | None | N | 0.091 | neutral | N | 0.473144449 | None | None | I |
N/T | 0.0841 | likely_benign | 0.0905 | benign | -0.507 | Destabilizing | None | N | 0.095 | neutral | N | 0.483881518 | None | None | I |
N/V | 0.1401 | likely_benign | 0.1587 | benign | -0.455 | Destabilizing | 0.081 | N | 0.391 | neutral | None | None | None | None | I |
N/W | 0.5115 | ambiguous | 0.5684 | pathogenic | -0.553 | Destabilizing | 0.935 | D | 0.451 | neutral | None | None | None | None | I |
N/Y | 0.1054 | likely_benign | 0.123 | benign | -0.387 | Destabilizing | 0.484 | N | 0.387 | neutral | N | 0.492849261 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.