Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8132 | 24619;24620;24621 | chr2:178718806;178718805;178718804 | chr2:179583533;179583532;179583531 |
N2AB | 7815 | 23668;23669;23670 | chr2:178718806;178718805;178718804 | chr2:179583533;179583532;179583531 |
N2A | 6888 | 20887;20888;20889 | chr2:178718806;178718805;178718804 | chr2:179583533;179583532;179583531 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.042 | N | 0.315 | 0.173 | 0.513787655203 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1735 | likely_benign | 0.1882 | benign | -1.48 | Destabilizing | 0.042 | N | 0.315 | neutral | N | 0.499491397 | None | None | N |
V/C | 0.6538 | likely_pathogenic | 0.6824 | pathogenic | -1.112 | Destabilizing | 0.958 | D | 0.512 | neutral | None | None | None | None | N |
V/D | 0.2881 | likely_benign | 0.3216 | benign | -1.393 | Destabilizing | 0.175 | N | 0.628 | neutral | D | 0.526322786 | None | None | N |
V/E | 0.1867 | likely_benign | 0.2041 | benign | -1.393 | Destabilizing | 0.124 | N | 0.563 | neutral | None | None | None | None | N |
V/F | 0.1144 | likely_benign | 0.1242 | benign | -1.165 | Destabilizing | 0.001 | N | 0.217 | neutral | D | 0.529768523 | None | None | N |
V/G | 0.2267 | likely_benign | 0.2441 | benign | -1.79 | Destabilizing | 0.175 | N | 0.593 | neutral | N | 0.506448946 | None | None | N |
V/H | 0.3489 | ambiguous | 0.3816 | ambiguous | -1.327 | Destabilizing | 0.002 | N | 0.443 | neutral | None | None | None | None | N |
V/I | 0.0718 | likely_benign | 0.073 | benign | -0.73 | Destabilizing | 0.001 | N | 0.156 | neutral | N | 0.504966079 | None | None | N |
V/K | 0.199 | likely_benign | 0.2129 | benign | -1.139 | Destabilizing | 0.001 | N | 0.426 | neutral | None | None | None | None | N |
V/L | 0.1416 | likely_benign | 0.1462 | benign | -0.73 | Destabilizing | None | N | 0.147 | neutral | N | 0.488497903 | None | None | N |
V/M | 0.1145 | likely_benign | 0.1192 | benign | -0.636 | Destabilizing | 0.009 | N | 0.243 | neutral | None | None | None | None | N |
V/N | 0.2384 | likely_benign | 0.266 | benign | -0.962 | Destabilizing | 0.22 | N | 0.627 | neutral | None | None | None | None | N |
V/P | 0.7504 | likely_pathogenic | 0.7715 | pathogenic | -0.946 | Destabilizing | 0.667 | D | 0.599 | neutral | None | None | None | None | N |
V/Q | 0.1877 | likely_benign | 0.2016 | benign | -1.156 | Destabilizing | 0.497 | N | 0.6 | neutral | None | None | None | None | N |
V/R | 0.1669 | likely_benign | 0.18 | benign | -0.657 | Destabilizing | 0.124 | N | 0.629 | neutral | None | None | None | None | N |
V/S | 0.1747 | likely_benign | 0.1898 | benign | -1.496 | Destabilizing | 0.124 | N | 0.55 | neutral | None | None | None | None | N |
V/T | 0.1498 | likely_benign | 0.1636 | benign | -1.391 | Destabilizing | 0.004 | N | 0.174 | neutral | None | None | None | None | N |
V/W | 0.6217 | likely_pathogenic | 0.6487 | pathogenic | -1.334 | Destabilizing | 0.958 | D | 0.587 | neutral | None | None | None | None | N |
V/Y | 0.382 | ambiguous | 0.4082 | ambiguous | -1.037 | Destabilizing | 0.124 | N | 0.554 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.