Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8136 | 24631;24632;24633 | chr2:178718794;178718793;178718792 | chr2:179583521;179583520;179583519 |
N2AB | 7819 | 23680;23681;23682 | chr2:178718794;178718793;178718792 | chr2:179583521;179583520;179583519 |
N2A | 6892 | 20899;20900;20901 | chr2:178718794;178718793;178718792 | chr2:179583521;179583520;179583519 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.722 | D | 0.594 | 0.488 | 0.561714622075 | gnomAD-4.0.0 | 1.59127E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85834E-06 | 0 | 0 |
E/Q | None | None | 0.075 | N | 0.41 | 0.182 | 0.272639205421 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2097 | likely_benign | 0.2111 | benign | -1.159 | Destabilizing | 0.722 | D | 0.547 | neutral | N | 0.496403979 | None | None | N |
E/C | 0.8618 | likely_pathogenic | 0.8563 | pathogenic | -0.689 | Destabilizing | 0.996 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/D | 0.2789 | likely_benign | 0.299 | benign | -1.361 | Destabilizing | 0.003 | N | 0.251 | neutral | N | 0.50738189 | None | None | N |
E/F | 0.7121 | likely_pathogenic | 0.7181 | pathogenic | -0.819 | Destabilizing | 0.961 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/G | 0.2976 | likely_benign | 0.301 | benign | -1.555 | Destabilizing | 0.722 | D | 0.594 | neutral | D | 0.522523631 | None | None | N |
E/H | 0.3687 | ambiguous | 0.3804 | ambiguous | -1.126 | Destabilizing | 0.961 | D | 0.575 | neutral | None | None | None | None | N |
E/I | 0.3591 | ambiguous | 0.3684 | ambiguous | -0.056 | Destabilizing | 0.096 | N | 0.514 | neutral | None | None | None | None | N |
E/K | 0.1597 | likely_benign | 0.1728 | benign | -1.023 | Destabilizing | 0.565 | D | 0.543 | neutral | N | 0.489162277 | None | None | N |
E/L | 0.3776 | ambiguous | 0.3906 | ambiguous | -0.056 | Destabilizing | 0.633 | D | 0.611 | neutral | None | None | None | None | N |
E/M | 0.437 | ambiguous | 0.4416 | ambiguous | 0.574 | Stabilizing | 0.989 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/N | 0.3658 | ambiguous | 0.3902 | ambiguous | -1.364 | Destabilizing | 0.858 | D | 0.545 | neutral | None | None | None | None | N |
E/P | 0.9712 | likely_pathogenic | 0.9694 | pathogenic | -0.404 | Destabilizing | 0.961 | D | 0.635 | neutral | None | None | None | None | N |
E/Q | 0.1039 | likely_benign | 0.1034 | benign | -1.19 | Destabilizing | 0.075 | N | 0.41 | neutral | N | 0.4841623 | None | None | N |
E/R | 0.2335 | likely_benign | 0.243 | benign | -0.868 | Destabilizing | 0.858 | D | 0.558 | neutral | None | None | None | None | N |
E/S | 0.2541 | likely_benign | 0.2558 | benign | -1.879 | Destabilizing | 0.775 | D | 0.514 | neutral | None | None | None | None | N |
E/T | 0.242 | likely_benign | 0.2461 | benign | -1.53 | Destabilizing | 0.775 | D | 0.569 | neutral | None | None | None | None | N |
E/V | 0.2122 | likely_benign | 0.2165 | benign | -0.404 | Destabilizing | 0.565 | D | 0.577 | neutral | N | 0.497021386 | None | None | N |
E/W | 0.8833 | likely_pathogenic | 0.8844 | pathogenic | -0.695 | Destabilizing | 0.996 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/Y | 0.6165 | likely_pathogenic | 0.6312 | pathogenic | -0.578 | Destabilizing | 0.987 | D | 0.686 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.