Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8138 | 24637;24638;24639 | chr2:178718788;178718787;178718786 | chr2:179583515;179583514;179583513 |
N2AB | 7821 | 23686;23687;23688 | chr2:178718788;178718787;178718786 | chr2:179583515;179583514;179583513 |
N2A | 6894 | 20905;20906;20907 | chr2:178718788;178718787;178718786 | chr2:179583515;179583514;179583513 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.055 | N | 0.391 | 0.069 | 0.464442853059 | gnomAD-4.0.0 | 1.36842E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31868E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.1832 | likely_benign | 0.1892 | benign | -1.649 | Destabilizing | 0.031 | N | 0.323 | neutral | None | None | None | None | N |
F/C | 0.2151 | likely_benign | 0.1906 | benign | -0.506 | Destabilizing | 0.828 | D | 0.366 | neutral | N | 0.497467162 | None | None | N |
F/D | 0.3479 | ambiguous | 0.3662 | ambiguous | 0.146 | Stabilizing | 0.038 | N | 0.447 | neutral | None | None | None | None | N |
F/E | 0.3875 | ambiguous | 0.4062 | ambiguous | 0.156 | Stabilizing | 0.001 | N | 0.26 | neutral | None | None | None | None | N |
F/G | 0.3488 | ambiguous | 0.3506 | ambiguous | -1.911 | Destabilizing | 0.072 | N | 0.449 | neutral | None | None | None | None | N |
F/H | 0.2107 | likely_benign | 0.2039 | benign | -0.422 | Destabilizing | 0.001 | N | 0.219 | neutral | None | None | None | None | N |
F/I | 0.1192 | likely_benign | 0.1266 | benign | -0.918 | Destabilizing | None | N | 0.129 | neutral | N | 0.480417138 | None | None | N |
F/K | 0.337 | likely_benign | 0.337 | benign | -0.346 | Destabilizing | 0.072 | N | 0.442 | neutral | None | None | None | None | N |
F/L | 0.3729 | ambiguous | 0.3709 | ambiguous | -0.918 | Destabilizing | None | N | 0.096 | neutral | N | 0.435914212 | None | None | N |
F/M | 0.2644 | likely_benign | 0.2533 | benign | -0.567 | Destabilizing | 0.12 | N | 0.313 | neutral | None | None | None | None | N |
F/N | 0.2401 | likely_benign | 0.2436 | benign | -0.126 | Destabilizing | 0.038 | N | 0.453 | neutral | None | None | None | None | N |
F/P | 0.5617 | ambiguous | 0.6154 | pathogenic | -1.147 | Destabilizing | 0.356 | N | 0.445 | neutral | None | None | None | None | N |
F/Q | 0.2982 | likely_benign | 0.2944 | benign | -0.301 | Destabilizing | 0.214 | N | 0.465 | neutral | None | None | None | None | N |
F/R | 0.2235 | likely_benign | 0.2276 | benign | 0.262 | Stabilizing | 0.214 | N | 0.467 | neutral | None | None | None | None | N |
F/S | 0.1214 | likely_benign | 0.1252 | benign | -0.958 | Destabilizing | 0.055 | N | 0.391 | neutral | N | 0.457076131 | None | None | N |
F/T | 0.16 | likely_benign | 0.1679 | benign | -0.858 | Destabilizing | 0.072 | N | 0.426 | neutral | None | None | None | None | N |
F/V | 0.1235 | likely_benign | 0.1267 | benign | -1.147 | Destabilizing | 0.004 | N | 0.331 | neutral | N | 0.49882954 | None | None | N |
F/W | 0.2282 | likely_benign | 0.2229 | benign | -0.527 | Destabilizing | 0.356 | N | 0.35 | neutral | None | None | None | None | N |
F/Y | 0.0937 | likely_benign | 0.0905 | benign | -0.525 | Destabilizing | None | N | 0.063 | neutral | N | 0.441282747 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.