Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8140 | 24643;24644;24645 | chr2:178718782;178718781;178718780 | chr2:179583509;179583508;179583507 |
N2AB | 7823 | 23692;23693;23694 | chr2:178718782;178718781;178718780 | chr2:179583509;179583508;179583507 |
N2A | 6896 | 20911;20912;20913 | chr2:178718782;178718781;178718780 | chr2:179583509;179583508;179583507 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs377210838 | -1.18 | 0.978 | D | 0.753 | 0.615 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/M | rs377210838 | -1.18 | 0.978 | D | 0.753 | 0.615 | None | gnomAD-4.0.0 | 1.36843E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9948E-07 | 0 | 1.65656E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3484 | ambiguous | 0.3282 | benign | -2.288 | Highly Destabilizing | 0.928 | D | 0.527 | neutral | N | 0.489633257 | None | None | N |
V/C | 0.8944 | likely_pathogenic | 0.8765 | pathogenic | -2.112 | Highly Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | N |
V/D | 0.9001 | likely_pathogenic | 0.9 | pathogenic | -2.974 | Highly Destabilizing | 0.997 | D | 0.776 | deleterious | None | None | None | None | N |
V/E | 0.85 | likely_pathogenic | 0.8515 | pathogenic | -2.806 | Highly Destabilizing | 0.989 | D | 0.744 | deleterious | D | 0.563325087 | None | None | N |
V/F | 0.458 | ambiguous | 0.4677 | ambiguous | -1.461 | Destabilizing | 0.968 | D | 0.759 | deleterious | None | None | None | None | N |
V/G | 0.4667 | ambiguous | 0.4724 | ambiguous | -2.776 | Highly Destabilizing | 0.989 | D | 0.745 | deleterious | D | 0.545220832 | None | None | N |
V/H | 0.9543 | likely_pathogenic | 0.9554 | pathogenic | -2.383 | Highly Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
V/I | 0.0936 | likely_benign | 0.0912 | benign | -0.946 | Destabilizing | 0.778 | D | 0.514 | neutral | None | None | None | None | N |
V/K | 0.8891 | likely_pathogenic | 0.8924 | pathogenic | -2.017 | Highly Destabilizing | 0.992 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/L | 0.3299 | likely_benign | 0.3066 | benign | -0.946 | Destabilizing | 0.039 | N | 0.313 | neutral | N | 0.490334954 | None | None | N |
V/M | 0.3199 | likely_benign | 0.2906 | benign | -1.083 | Destabilizing | 0.978 | D | 0.753 | deleterious | D | 0.536320062 | None | None | N |
V/N | 0.7903 | likely_pathogenic | 0.7808 | pathogenic | -2.266 | Highly Destabilizing | 0.997 | D | 0.784 | deleterious | None | None | None | None | N |
V/P | 0.7929 | likely_pathogenic | 0.828 | pathogenic | -1.365 | Destabilizing | 0.997 | D | 0.754 | deleterious | None | None | None | None | N |
V/Q | 0.8687 | likely_pathogenic | 0.8651 | pathogenic | -2.21 | Highly Destabilizing | 0.997 | D | 0.771 | deleterious | None | None | None | None | N |
V/R | 0.8585 | likely_pathogenic | 0.8652 | pathogenic | -1.673 | Destabilizing | 0.992 | D | 0.783 | deleterious | None | None | None | None | N |
V/S | 0.6064 | likely_pathogenic | 0.584 | pathogenic | -2.868 | Highly Destabilizing | 0.992 | D | 0.72 | prob.delet. | None | None | None | None | N |
V/T | 0.4271 | ambiguous | 0.392 | ambiguous | -2.567 | Highly Destabilizing | 0.944 | D | 0.633 | neutral | None | None | None | None | N |
V/W | 0.9681 | likely_pathogenic | 0.9691 | pathogenic | -1.895 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
V/Y | 0.8896 | likely_pathogenic | 0.8962 | pathogenic | -1.58 | Destabilizing | 0.992 | D | 0.759 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.