Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8145 | 24658;24659;24660 | chr2:178718767;178718766;178718765 | chr2:179583494;179583493;179583492 |
N2AB | 7828 | 23707;23708;23709 | chr2:178718767;178718766;178718765 | chr2:179583494;179583493;179583492 |
N2A | 6901 | 20926;20927;20928 | chr2:178718767;178718766;178718765 | chr2:179583494;179583493;179583492 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs1560647433 | None | 0.896 | N | 0.518 | 0.271 | 0.278143212241 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
S/N | rs1560647433 | None | 0.896 | N | 0.518 | 0.271 | 0.278143212241 | gnomAD-4.0.0 | 2.05264E-06 | None | None | None | None | N | None | 0 | 2.23594E-05 | None | 0 | 0 | None | 0 | 0 | 1.79897E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1076 | likely_benign | 0.123 | benign | -0.688 | Destabilizing | 0.06 | N | 0.182 | neutral | None | None | None | None | N |
S/C | 0.2847 | likely_benign | 0.329 | benign | -0.342 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | D | 0.525818995 | None | None | N |
S/D | 0.6081 | likely_pathogenic | 0.6442 | pathogenic | 0.261 | Stabilizing | 0.919 | D | 0.509 | neutral | None | None | None | None | N |
S/E | 0.6829 | likely_pathogenic | 0.7401 | pathogenic | 0.306 | Stabilizing | 0.919 | D | 0.525 | neutral | None | None | None | None | N |
S/F | 0.5738 | likely_pathogenic | 0.6567 | pathogenic | -0.786 | Destabilizing | 0.988 | D | 0.778 | deleterious | None | None | None | None | N |
S/G | 0.0943 | likely_benign | 0.1218 | benign | -0.973 | Destabilizing | 0.78 | D | 0.569 | neutral | N | 0.501674352 | None | None | N |
S/H | 0.6381 | likely_pathogenic | 0.7091 | pathogenic | -1.328 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | N |
S/I | 0.4218 | ambiguous | 0.507 | ambiguous | -0.024 | Destabilizing | 0.968 | D | 0.732 | prob.delet. | N | 0.50918277 | None | None | N |
S/K | 0.7863 | likely_pathogenic | 0.8561 | pathogenic | -0.29 | Destabilizing | 0.919 | D | 0.53 | neutral | None | None | None | None | N |
S/L | 0.2549 | likely_benign | 0.2996 | benign | -0.024 | Destabilizing | 0.851 | D | 0.657 | neutral | None | None | None | None | N |
S/M | 0.3442 | ambiguous | 0.3952 | ambiguous | 0.049 | Stabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
S/N | 0.2352 | likely_benign | 0.2777 | benign | -0.375 | Destabilizing | 0.896 | D | 0.518 | neutral | N | 0.515904267 | None | None | N |
S/P | 0.6606 | likely_pathogenic | 0.6781 | pathogenic | -0.211 | Destabilizing | 0.988 | D | 0.689 | prob.neutral | None | None | None | None | N |
S/Q | 0.6618 | likely_pathogenic | 0.736 | pathogenic | -0.388 | Destabilizing | 0.988 | D | 0.549 | neutral | None | None | None | None | N |
S/R | 0.703 | likely_pathogenic | 0.8098 | pathogenic | -0.362 | Destabilizing | 0.968 | D | 0.696 | prob.neutral | N | 0.4989521 | None | None | N |
S/T | 0.125 | likely_benign | 0.1283 | benign | -0.401 | Destabilizing | 0.103 | N | 0.346 | neutral | N | 0.485936727 | None | None | N |
S/V | 0.4466 | ambiguous | 0.4973 | ambiguous | -0.211 | Destabilizing | 0.851 | D | 0.655 | neutral | None | None | None | None | N |
S/W | 0.6784 | likely_pathogenic | 0.7472 | pathogenic | -0.794 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
S/Y | 0.4742 | ambiguous | 0.55 | ambiguous | -0.478 | Destabilizing | 0.996 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.