Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8183 | 24772;24773;24774 | chr2:178718559;178718558;178718557 | chr2:179583286;179583285;179583284 |
N2AB | 7866 | 23821;23822;23823 | chr2:178718559;178718558;178718557 | chr2:179583286;179583285;179583284 |
N2A | 6939 | 21040;21041;21042 | chr2:178718559;178718558;178718557 | chr2:179583286;179583285;179583284 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.979 | N | 0.327 | 0.33 | 0.250039746154 | gnomAD-4.0.0 | 2.05312E-06 | None | None | None | None | I | None | 5.978E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99633E-07 | 0 | 0 |
E/Q | rs201365398 | 0.44 | 0.959 | N | 0.376 | 0.261 | None | gnomAD-2.1.1 | 9.66E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 6.81417E-04 | 5.48E-05 | 4.23131E-04 |
E/Q | rs201365398 | 0.44 | 0.959 | N | 0.376 | 0.261 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 4.71431E-04 | 0 | 0 | 0 | 0 |
E/Q | rs201365398 | 0.44 | 0.959 | N | 0.376 | 0.261 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 0 | 1E-03 | None | None | None | 0 | None |
E/Q | rs201365398 | 0.44 | 0.959 | N | 0.376 | 0.261 | None | gnomAD-4.0.0 | 5.45413E-05 | None | None | None | None | I | None | 0 | 1.6665E-05 | None | 0 | 0 | None | 1.25051E-03 | 0 | 4.23882E-06 | 0 | 3.20205E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.198 | likely_benign | 0.1961 | benign | -0.366 | Destabilizing | 0.906 | D | 0.394 | neutral | D | 0.531768678 | None | None | I |
E/C | 0.9392 | likely_pathogenic | 0.9346 | pathogenic | 0.024 | Stabilizing | 1.0 | D | 0.466 | neutral | None | None | None | None | I |
E/D | 0.2824 | likely_benign | 0.3011 | benign | -0.264 | Destabilizing | 0.979 | D | 0.327 | neutral | N | 0.513876351 | None | None | I |
E/F | 0.8568 | likely_pathogenic | 0.8624 | pathogenic | -0.273 | Destabilizing | 0.088 | N | 0.404 | neutral | None | None | None | None | I |
E/G | 0.2601 | likely_benign | 0.2701 | benign | -0.538 | Destabilizing | 0.979 | D | 0.467 | neutral | N | 0.514040934 | None | None | I |
E/H | 0.6487 | likely_pathogenic | 0.6748 | pathogenic | -0.001 | Destabilizing | 0.999 | D | 0.355 | neutral | None | None | None | None | I |
E/I | 0.5092 | ambiguous | 0.5022 | ambiguous | 0.048 | Stabilizing | 0.939 | D | 0.462 | neutral | None | None | None | None | I |
E/K | 0.1582 | likely_benign | 0.1671 | benign | 0.495 | Stabilizing | 0.238 | N | 0.237 | neutral | D | 0.523263838 | None | None | I |
E/L | 0.5169 | ambiguous | 0.5214 | ambiguous | 0.048 | Stabilizing | 0.088 | N | 0.329 | neutral | None | None | None | None | I |
E/M | 0.5707 | likely_pathogenic | 0.5737 | pathogenic | 0.146 | Stabilizing | 0.991 | D | 0.453 | neutral | None | None | None | None | I |
E/N | 0.4017 | ambiguous | 0.4287 | ambiguous | 0.105 | Stabilizing | 0.995 | D | 0.361 | neutral | None | None | None | None | I |
E/P | 0.4889 | ambiguous | 0.4944 | ambiguous | -0.07 | Destabilizing | 0.999 | D | 0.419 | neutral | None | None | None | None | I |
E/Q | 0.1497 | likely_benign | 0.1531 | benign | 0.145 | Stabilizing | 0.959 | D | 0.376 | neutral | N | 0.500002976 | None | None | I |
E/R | 0.2974 | likely_benign | 0.3196 | benign | 0.629 | Stabilizing | 0.939 | D | 0.367 | neutral | None | None | None | None | I |
E/S | 0.3058 | likely_benign | 0.3241 | benign | -0.012 | Destabilizing | 0.969 | D | 0.341 | neutral | None | None | None | None | I |
E/T | 0.3225 | likely_benign | 0.3282 | benign | 0.139 | Stabilizing | 0.984 | D | 0.426 | neutral | None | None | None | None | I |
E/V | 0.2892 | likely_benign | 0.2906 | benign | -0.07 | Destabilizing | 0.921 | D | 0.448 | neutral | N | 0.506585019 | None | None | I |
E/W | 0.9714 | likely_pathogenic | 0.9716 | pathogenic | -0.127 | Destabilizing | 1.0 | D | 0.47 | neutral | None | None | None | None | I |
E/Y | 0.8024 | likely_pathogenic | 0.8117 | pathogenic | -0.029 | Destabilizing | 0.982 | D | 0.451 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.