Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC818324772;24773;24774 chr2:178718559;178718558;178718557chr2:179583286;179583285;179583284
N2AB786623821;23822;23823 chr2:178718559;178718558;178718557chr2:179583286;179583285;179583284
N2A693921040;21041;21042 chr2:178718559;178718558;178718557chr2:179583286;179583285;179583284
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAG
  • RefSeq wild type template codon: CTC
  • Domain: Ig-67
  • Domain position: 13
  • Structural Position: 18
  • Q(SASA): 0.5323
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/D None None 0.979 N 0.327 0.33 0.250039746154 gnomAD-4.0.0 2.05312E-06 None None None None I None 5.978E-05 0 None 0 0 None 0 0 8.99633E-07 0 0
E/Q rs201365398 0.44 0.959 N 0.376 0.261 None gnomAD-2.1.1 9.66E-05 None None None None I None 0 0 None 0 0 None 0 None 6.81417E-04 5.48E-05 4.23131E-04
E/Q rs201365398 0.44 0.959 N 0.376 0.261 None gnomAD-3.1.2 3.29E-05 None None None None I None 0 0 0 0 0 None 4.71431E-04 0 0 0 0
E/Q rs201365398 0.44 0.959 N 0.376 0.261 None 1000 genomes 1.99681E-04 None None None None I None 0 0 None None 0 1E-03 None None None 0 None
E/Q rs201365398 0.44 0.959 N 0.376 0.261 None gnomAD-4.0.0 5.45413E-05 None None None None I None 0 1.6665E-05 None 0 0 None 1.25051E-03 0 4.23882E-06 0 3.20205E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.198 likely_benign 0.1961 benign -0.366 Destabilizing 0.906 D 0.394 neutral D 0.531768678 None None I
E/C 0.9392 likely_pathogenic 0.9346 pathogenic 0.024 Stabilizing 1.0 D 0.466 neutral None None None None I
E/D 0.2824 likely_benign 0.3011 benign -0.264 Destabilizing 0.979 D 0.327 neutral N 0.513876351 None None I
E/F 0.8568 likely_pathogenic 0.8624 pathogenic -0.273 Destabilizing 0.088 N 0.404 neutral None None None None I
E/G 0.2601 likely_benign 0.2701 benign -0.538 Destabilizing 0.979 D 0.467 neutral N 0.514040934 None None I
E/H 0.6487 likely_pathogenic 0.6748 pathogenic -0.001 Destabilizing 0.999 D 0.355 neutral None None None None I
E/I 0.5092 ambiguous 0.5022 ambiguous 0.048 Stabilizing 0.939 D 0.462 neutral None None None None I
E/K 0.1582 likely_benign 0.1671 benign 0.495 Stabilizing 0.238 N 0.237 neutral D 0.523263838 None None I
E/L 0.5169 ambiguous 0.5214 ambiguous 0.048 Stabilizing 0.088 N 0.329 neutral None None None None I
E/M 0.5707 likely_pathogenic 0.5737 pathogenic 0.146 Stabilizing 0.991 D 0.453 neutral None None None None I
E/N 0.4017 ambiguous 0.4287 ambiguous 0.105 Stabilizing 0.995 D 0.361 neutral None None None None I
E/P 0.4889 ambiguous 0.4944 ambiguous -0.07 Destabilizing 0.999 D 0.419 neutral None None None None I
E/Q 0.1497 likely_benign 0.1531 benign 0.145 Stabilizing 0.959 D 0.376 neutral N 0.500002976 None None I
E/R 0.2974 likely_benign 0.3196 benign 0.629 Stabilizing 0.939 D 0.367 neutral None None None None I
E/S 0.3058 likely_benign 0.3241 benign -0.012 Destabilizing 0.969 D 0.341 neutral None None None None I
E/T 0.3225 likely_benign 0.3282 benign 0.139 Stabilizing 0.984 D 0.426 neutral None None None None I
E/V 0.2892 likely_benign 0.2906 benign -0.07 Destabilizing 0.921 D 0.448 neutral N 0.506585019 None None I
E/W 0.9714 likely_pathogenic 0.9716 pathogenic -0.127 Destabilizing 1.0 D 0.47 neutral None None None None I
E/Y 0.8024 likely_pathogenic 0.8117 pathogenic -0.029 Destabilizing 0.982 D 0.451 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.