Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8201 | 24826;24827;24828 | chr2:178718505;178718504;178718503 | chr2:179583232;179583231;179583230 |
N2AB | 7884 | 23875;23876;23877 | chr2:178718505;178718504;178718503 | chr2:179583232;179583231;179583230 |
N2A | 6957 | 21094;21095;21096 | chr2:178718505;178718504;178718503 | chr2:179583232;179583231;179583230 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs1397176546 | -0.071 | 0.662 | N | 0.465 | 0.394 | 0.337621943819 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0727 | likely_benign | 0.0714 | benign | -0.348 | Destabilizing | None | N | 0.046 | neutral | N | 0.489308767 | None | None | I |
S/C | 0.1561 | likely_benign | 0.1526 | benign | -0.401 | Destabilizing | 0.901 | D | 0.444 | neutral | None | None | None | None | I |
S/D | 0.2707 | likely_benign | 0.298 | benign | 0.053 | Stabilizing | 0.002 | N | 0.119 | neutral | None | None | None | None | I |
S/E | 0.3294 | likely_benign | 0.3598 | ambiguous | 0.016 | Stabilizing | 0.007 | N | 0.113 | neutral | None | None | None | None | I |
S/F | 0.1147 | likely_benign | 0.1298 | benign | -0.656 | Destabilizing | 0.004 | N | 0.267 | neutral | None | None | None | None | I |
S/G | 0.1337 | likely_benign | 0.135 | benign | -0.55 | Destabilizing | 0.103 | N | 0.23 | neutral | None | None | None | None | I |
S/H | 0.2249 | likely_benign | 0.2452 | benign | -1.01 | Destabilizing | 0.901 | D | 0.451 | neutral | None | None | None | None | I |
S/I | 0.1384 | likely_benign | 0.1475 | benign | 0.063 | Stabilizing | 0.39 | N | 0.469 | neutral | None | None | None | None | I |
S/K | 0.3826 | ambiguous | 0.4239 | ambiguous | -0.627 | Destabilizing | 0.345 | N | 0.301 | neutral | None | None | None | None | I |
S/L | 0.0845 | likely_benign | 0.0876 | benign | 0.063 | Stabilizing | 0.064 | N | 0.273 | neutral | N | 0.518554239 | None | None | I |
S/M | 0.1651 | likely_benign | 0.1758 | benign | 0.094 | Stabilizing | 0.103 | N | 0.226 | neutral | None | None | None | None | I |
S/N | 0.1311 | likely_benign | 0.1402 | benign | -0.487 | Destabilizing | 0.002 | N | 0.131 | neutral | None | None | None | None | I |
S/P | 0.642 | likely_pathogenic | 0.6065 | pathogenic | -0.041 | Destabilizing | 0.662 | D | 0.465 | neutral | N | 0.517500882 | None | None | I |
S/Q | 0.3344 | likely_benign | 0.3653 | ambiguous | -0.621 | Destabilizing | 0.561 | D | 0.313 | neutral | None | None | None | None | I |
S/R | 0.3171 | likely_benign | 0.3605 | ambiguous | -0.486 | Destabilizing | 0.561 | D | 0.453 | neutral | None | None | None | None | I |
S/T | 0.0707 | likely_benign | 0.0737 | benign | -0.502 | Destabilizing | 0.285 | N | 0.284 | neutral | N | 0.448576865 | None | None | I |
S/V | 0.1402 | likely_benign | 0.1461 | benign | -0.041 | Destabilizing | 0.209 | N | 0.337 | neutral | None | None | None | None | I |
S/W | 0.2564 | likely_benign | 0.2737 | benign | -0.695 | Destabilizing | 0.991 | D | 0.507 | neutral | None | None | None | None | I |
S/Y | 0.1159 | likely_benign | 0.1262 | benign | -0.406 | Destabilizing | 0.39 | N | 0.573 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.