Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8208 | 24847;24848;24849 | chr2:178718484;178718483;178718482 | chr2:179583211;179583210;179583209 |
N2AB | 7891 | 23896;23897;23898 | chr2:178718484;178718483;178718482 | chr2:179583211;179583210;179583209 |
N2A | 6964 | 21115;21116;21117 | chr2:178718484;178718483;178718482 | chr2:179583211;179583210;179583209 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs190192954 | 0.453 | 0.331 | N | 0.26 | 0.261 | None | gnomAD-2.1.1 | 5.72E-05 | None | None | None | None | I | None | 5.37412E-04 | 5.66E-05 | None | 0 | 0 | None | 0 | None | 0 | 7.83E-06 | 0 |
E/K | rs190192954 | 0.453 | 0.331 | N | 0.26 | 0.261 | None | gnomAD-3.1.2 | 1.44645E-04 | None | None | None | None | I | None | 4.34573E-04 | 1.96515E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.77555E-04 |
E/K | rs190192954 | 0.453 | 0.331 | N | 0.26 | 0.261 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
E/K | rs190192954 | 0.453 | 0.331 | N | 0.26 | 0.261 | None | gnomAD-4.0.0 | 3.16047E-05 | None | None | None | None | I | None | 5.19986E-04 | 8.33361E-05 | None | 0 | 0 | None | 0 | 0 | 3.39064E-06 | 0 | 4.80215E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1174 | likely_benign | 0.1201 | benign | -0.378 | Destabilizing | 0.001 | N | 0.168 | neutral | N | 0.504943783 | None | None | I |
E/C | 0.709 | likely_pathogenic | 0.684 | pathogenic | -0.375 | Destabilizing | 0.958 | D | 0.329 | neutral | None | None | None | None | I |
E/D | 0.0771 | likely_benign | 0.0819 | benign | -0.372 | Destabilizing | None | N | 0.102 | neutral | N | 0.448183636 | None | None | I |
E/F | 0.6172 | likely_pathogenic | 0.6159 | pathogenic | -0.098 | Destabilizing | 0.859 | D | 0.361 | neutral | None | None | None | None | I |
E/G | 0.0682 | likely_benign | 0.0645 | benign | -0.569 | Destabilizing | None | N | 0.15 | neutral | N | 0.323462127 | None | None | I |
E/H | 0.2689 | likely_benign | 0.2815 | benign | 0.422 | Stabilizing | 0.859 | D | 0.293 | neutral | None | None | None | None | I |
E/I | 0.3252 | likely_benign | 0.3286 | benign | 0.096 | Stabilizing | 0.667 | D | 0.412 | neutral | None | None | None | None | I |
E/K | 0.079 | likely_benign | 0.077 | benign | 0.205 | Stabilizing | 0.331 | N | 0.26 | neutral | N | 0.510002886 | None | None | I |
E/L | 0.3646 | ambiguous | 0.3677 | ambiguous | 0.096 | Stabilizing | 0.22 | N | 0.426 | neutral | None | None | None | None | I |
E/M | 0.3726 | ambiguous | 0.3709 | ambiguous | -0.035 | Destabilizing | 0.859 | D | 0.325 | neutral | None | None | None | None | I |
E/N | 0.107 | likely_benign | 0.1138 | benign | -0.267 | Destabilizing | 0.124 | N | 0.245 | neutral | None | None | None | None | I |
E/P | 0.4474 | ambiguous | 0.4874 | ambiguous | -0.043 | Destabilizing | 0.364 | N | 0.427 | neutral | None | None | None | None | I |
E/Q | 0.1015 | likely_benign | 0.1045 | benign | -0.202 | Destabilizing | 0.523 | D | 0.325 | neutral | N | 0.511043036 | None | None | I |
E/R | 0.1427 | likely_benign | 0.143 | benign | 0.58 | Stabilizing | 0.364 | N | 0.294 | neutral | None | None | None | None | I |
E/S | 0.1043 | likely_benign | 0.1065 | benign | -0.409 | Destabilizing | 0.055 | N | 0.239 | neutral | None | None | None | None | I |
E/T | 0.1409 | likely_benign | 0.1435 | benign | -0.239 | Destabilizing | 0.22 | N | 0.331 | neutral | None | None | None | None | I |
E/V | 0.2361 | likely_benign | 0.2385 | benign | -0.043 | Destabilizing | 0.175 | N | 0.385 | neutral | N | 0.473088807 | None | None | I |
E/W | 0.7686 | likely_pathogenic | 0.7698 | pathogenic | 0.092 | Stabilizing | 0.958 | D | 0.342 | neutral | None | None | None | None | I |
E/Y | 0.427 | ambiguous | 0.4434 | ambiguous | 0.151 | Stabilizing | 0.859 | D | 0.345 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.