Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC820824847;24848;24849 chr2:178718484;178718483;178718482chr2:179583211;179583210;179583209
N2AB789123896;23897;23898 chr2:178718484;178718483;178718482chr2:179583211;179583210;179583209
N2A696421115;21116;21117 chr2:178718484;178718483;178718482chr2:179583211;179583210;179583209
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAG
  • RefSeq wild type template codon: CTC
  • Domain: Ig-67
  • Domain position: 38
  • Structural Position: 52
  • Q(SASA): 0.8527
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/K rs190192954 0.453 0.331 N 0.26 0.261 None gnomAD-2.1.1 5.72E-05 None None None None I None 5.37412E-04 5.66E-05 None 0 0 None 0 None 0 7.83E-06 0
E/K rs190192954 0.453 0.331 N 0.26 0.261 None gnomAD-3.1.2 1.44645E-04 None None None None I None 4.34573E-04 1.96515E-04 0 0 0 None 0 0 0 0 4.77555E-04
E/K rs190192954 0.453 0.331 N 0.26 0.261 None 1000 genomes 1.99681E-04 None None None None I None 0 1.4E-03 None None 0 0 None None None 0 None
E/K rs190192954 0.453 0.331 N 0.26 0.261 None gnomAD-4.0.0 3.16047E-05 None None None None I None 5.19986E-04 8.33361E-05 None 0 0 None 0 0 3.39064E-06 0 4.80215E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.1174 likely_benign 0.1201 benign -0.378 Destabilizing 0.001 N 0.168 neutral N 0.504943783 None None I
E/C 0.709 likely_pathogenic 0.684 pathogenic -0.375 Destabilizing 0.958 D 0.329 neutral None None None None I
E/D 0.0771 likely_benign 0.0819 benign -0.372 Destabilizing None N 0.102 neutral N 0.448183636 None None I
E/F 0.6172 likely_pathogenic 0.6159 pathogenic -0.098 Destabilizing 0.859 D 0.361 neutral None None None None I
E/G 0.0682 likely_benign 0.0645 benign -0.569 Destabilizing None N 0.15 neutral N 0.323462127 None None I
E/H 0.2689 likely_benign 0.2815 benign 0.422 Stabilizing 0.859 D 0.293 neutral None None None None I
E/I 0.3252 likely_benign 0.3286 benign 0.096 Stabilizing 0.667 D 0.412 neutral None None None None I
E/K 0.079 likely_benign 0.077 benign 0.205 Stabilizing 0.331 N 0.26 neutral N 0.510002886 None None I
E/L 0.3646 ambiguous 0.3677 ambiguous 0.096 Stabilizing 0.22 N 0.426 neutral None None None None I
E/M 0.3726 ambiguous 0.3709 ambiguous -0.035 Destabilizing 0.859 D 0.325 neutral None None None None I
E/N 0.107 likely_benign 0.1138 benign -0.267 Destabilizing 0.124 N 0.245 neutral None None None None I
E/P 0.4474 ambiguous 0.4874 ambiguous -0.043 Destabilizing 0.364 N 0.427 neutral None None None None I
E/Q 0.1015 likely_benign 0.1045 benign -0.202 Destabilizing 0.523 D 0.325 neutral N 0.511043036 None None I
E/R 0.1427 likely_benign 0.143 benign 0.58 Stabilizing 0.364 N 0.294 neutral None None None None I
E/S 0.1043 likely_benign 0.1065 benign -0.409 Destabilizing 0.055 N 0.239 neutral None None None None I
E/T 0.1409 likely_benign 0.1435 benign -0.239 Destabilizing 0.22 N 0.331 neutral None None None None I
E/V 0.2361 likely_benign 0.2385 benign -0.043 Destabilizing 0.175 N 0.385 neutral N 0.473088807 None None I
E/W 0.7686 likely_pathogenic 0.7698 pathogenic 0.092 Stabilizing 0.958 D 0.342 neutral None None None None I
E/Y 0.427 ambiguous 0.4434 ambiguous 0.151 Stabilizing 0.859 D 0.345 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.