Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8227 | 24904;24905;24906 | chr2:178718427;178718426;178718425 | chr2:179583154;179583153;179583152 |
N2AB | 7910 | 23953;23954;23955 | chr2:178718427;178718426;178718425 | chr2:179583154;179583153;179583152 |
N2A | 6983 | 21172;21173;21174 | chr2:178718427;178718426;178718425 | chr2:179583154;179583153;179583152 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs1300167182 | -1.305 | 0.994 | N | 0.561 | 0.353 | 0.498513350342 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
I/M | rs1300167182 | -1.305 | 0.994 | N | 0.561 | 0.353 | 0.498513350342 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
I/M | rs1300167182 | -1.305 | 0.994 | N | 0.561 | 0.353 | 0.498513350342 | gnomAD-4.0.0 | 8.67628E-06 | None | None | None | None | I | None | 0 | 1.667E-05 | None | 0 | 0 | None | 0 | 0 | 1.10194E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6743 | likely_pathogenic | 0.6869 | pathogenic | -2.183 | Highly Destabilizing | 0.993 | D | 0.534 | neutral | None | None | None | None | I |
I/C | 0.8895 | likely_pathogenic | 0.9052 | pathogenic | -1.52 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
I/D | 0.9546 | likely_pathogenic | 0.9611 | pathogenic | -2.048 | Highly Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | I |
I/E | 0.8998 | likely_pathogenic | 0.8958 | pathogenic | -1.969 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | I |
I/F | 0.3543 | ambiguous | 0.3476 | ambiguous | -1.452 | Destabilizing | 0.323 | N | 0.439 | neutral | None | None | None | None | I |
I/G | 0.9188 | likely_pathogenic | 0.9242 | pathogenic | -2.596 | Highly Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | I |
I/H | 0.7981 | likely_pathogenic | 0.8171 | pathogenic | -1.816 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
I/K | 0.7357 | likely_pathogenic | 0.741 | pathogenic | -1.514 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | N | 0.48085371 | None | None | I |
I/L | 0.2201 | likely_benign | 0.2282 | benign | -1.062 | Destabilizing | 0.061 | N | 0.257 | neutral | N | 0.485919819 | None | None | I |
I/M | 0.222 | likely_benign | 0.2094 | benign | -0.915 | Destabilizing | 0.994 | D | 0.561 | neutral | N | 0.500011603 | None | None | I |
I/N | 0.6904 | likely_pathogenic | 0.7429 | pathogenic | -1.494 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | I |
I/P | 0.9884 | likely_pathogenic | 0.9889 | pathogenic | -1.409 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | I |
I/Q | 0.7794 | likely_pathogenic | 0.7811 | pathogenic | -1.611 | Destabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | I |
I/R | 0.5868 | likely_pathogenic | 0.5981 | pathogenic | -0.968 | Destabilizing | 0.999 | D | 0.763 | deleterious | N | 0.520954252 | None | None | I |
I/S | 0.6209 | likely_pathogenic | 0.6763 | pathogenic | -2.178 | Highly Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | I |
I/T | 0.5992 | likely_pathogenic | 0.6488 | pathogenic | -1.975 | Destabilizing | 0.99 | D | 0.578 | neutral | N | 0.4861641 | None | None | I |
I/V | 0.1264 | likely_benign | 0.1224 | benign | -1.409 | Destabilizing | 0.817 | D | 0.458 | neutral | N | 0.479801062 | None | None | I |
I/W | 0.9003 | likely_pathogenic | 0.9085 | pathogenic | -1.623 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
I/Y | 0.7107 | likely_pathogenic | 0.7361 | pathogenic | -1.388 | Destabilizing | 0.991 | D | 0.602 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.