Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8229 | 24910;24911;24912 | chr2:178718421;178718420;178718419 | chr2:179583148;179583147;179583146 |
N2AB | 7912 | 23959;23960;23961 | chr2:178718421;178718420;178718419 | chr2:179583148;179583147;179583146 |
N2A | 6985 | 21178;21179;21180 | chr2:178718421;178718420;178718419 | chr2:179583148;179583147;179583146 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs761867872 | -1.062 | 0.99 | N | 0.579 | 0.325 | 0.394230963961 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs761867872 | -1.062 | 0.99 | N | 0.579 | 0.325 | 0.394230963961 | gnomAD-4.0.0 | 6.84215E-07 | None | None | None | None | N | None | 2.98793E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | None | None | 0.4 | N | 0.335 | 0.277 | 0.300784259202 | gnomAD-4.0.0 | 1.59132E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88253E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6151 | likely_pathogenic | 0.6927 | pathogenic | -0.981 | Destabilizing | 0.98 | D | 0.607 | neutral | N | 0.516812412 | None | None | N |
E/C | 0.9787 | likely_pathogenic | 0.983 | pathogenic | -0.51 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/D | 0.6541 | likely_pathogenic | 0.6906 | pathogenic | -1.172 | Destabilizing | 0.99 | D | 0.579 | neutral | N | 0.509686068 | None | None | N |
E/F | 0.969 | likely_pathogenic | 0.9765 | pathogenic | -0.488 | Destabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | N |
E/G | 0.7167 | likely_pathogenic | 0.7766 | pathogenic | -1.366 | Destabilizing | 0.135 | N | 0.489 | neutral | N | 0.518079859 | None | None | N |
E/H | 0.8063 | likely_pathogenic | 0.8668 | pathogenic | -0.818 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
E/I | 0.831 | likely_pathogenic | 0.8729 | pathogenic | 0.079 | Stabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
E/K | 0.5684 | likely_pathogenic | 0.7132 | pathogenic | -0.629 | Destabilizing | 0.4 | N | 0.335 | neutral | N | 0.517839376 | None | None | N |
E/L | 0.8607 | likely_pathogenic | 0.891 | pathogenic | 0.079 | Stabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/M | 0.8605 | likely_pathogenic | 0.8838 | pathogenic | 0.593 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/N | 0.7686 | likely_pathogenic | 0.822 | pathogenic | -1.099 | Destabilizing | 0.998 | D | 0.611 | neutral | None | None | None | None | N |
E/P | 0.9973 | likely_pathogenic | 0.9978 | pathogenic | -0.254 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/Q | 0.2966 | likely_benign | 0.372 | ambiguous | -0.95 | Destabilizing | 0.98 | D | 0.595 | neutral | N | 0.4841623 | None | None | N |
E/R | 0.6862 | likely_pathogenic | 0.8001 | pathogenic | -0.467 | Destabilizing | 0.971 | D | 0.581 | neutral | None | None | None | None | N |
E/S | 0.6528 | likely_pathogenic | 0.7129 | pathogenic | -1.493 | Destabilizing | 0.985 | D | 0.571 | neutral | None | None | None | None | N |
E/T | 0.6391 | likely_pathogenic | 0.6981 | pathogenic | -1.156 | Destabilizing | 0.998 | D | 0.669 | neutral | None | None | None | None | N |
E/V | 0.6046 | likely_pathogenic | 0.6746 | pathogenic | -0.254 | Destabilizing | 0.997 | D | 0.679 | prob.neutral | D | 0.525573424 | None | None | N |
E/W | 0.9905 | likely_pathogenic | 0.9918 | pathogenic | -0.258 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/Y | 0.9378 | likely_pathogenic | 0.9556 | pathogenic | -0.216 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.