Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8230 | 24913;24914;24915 | chr2:178718418;178718417;178718416 | chr2:179583145;179583144;179583143 |
N2AB | 7913 | 23962;23963;23964 | chr2:178718418;178718417;178718416 | chr2:179583145;179583144;179583143 |
N2A | 6986 | 21181;21182;21183 | chr2:178718418;178718417;178718416 | chr2:179583145;179583144;179583143 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.002 | D | 0.291 | 0.383 | 0.631027719221 | gnomAD-4.0.0 | 1.5913E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88253E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9114 | likely_pathogenic | 0.9048 | pathogenic | -2.485 | Highly Destabilizing | 0.176 | N | 0.547 | neutral | None | None | None | None | N |
I/C | 0.902 | likely_pathogenic | 0.89 | pathogenic | -1.854 | Destabilizing | 0.981 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/D | 0.9753 | likely_pathogenic | 0.9746 | pathogenic | -2.491 | Highly Destabilizing | 0.704 | D | 0.755 | deleterious | None | None | None | None | N |
I/E | 0.9593 | likely_pathogenic | 0.9604 | pathogenic | -2.347 | Highly Destabilizing | 0.704 | D | 0.739 | prob.delet. | None | None | None | None | N |
I/F | 0.3216 | likely_benign | 0.3106 | benign | -1.482 | Destabilizing | 0.863 | D | 0.661 | neutral | D | 0.595008985 | None | None | N |
I/G | 0.9697 | likely_pathogenic | 0.9709 | pathogenic | -2.968 | Highly Destabilizing | 0.003 | N | 0.567 | neutral | None | None | None | None | N |
I/H | 0.8975 | likely_pathogenic | 0.8917 | pathogenic | -2.254 | Highly Destabilizing | 0.995 | D | 0.813 | deleterious | None | None | None | None | N |
I/K | 0.8825 | likely_pathogenic | 0.8863 | pathogenic | -1.939 | Destabilizing | 0.704 | D | 0.737 | prob.delet. | None | None | None | None | N |
I/L | 0.2335 | likely_benign | 0.2214 | benign | -1.127 | Destabilizing | 0.139 | N | 0.373 | neutral | D | 0.574930656 | None | None | N |
I/M | 0.2195 | likely_benign | 0.2115 | benign | -1.042 | Destabilizing | 0.139 | N | 0.386 | neutral | D | 0.620143488 | None | None | N |
I/N | 0.7298 | likely_pathogenic | 0.7308 | pathogenic | -2.035 | Highly Destabilizing | 0.642 | D | 0.767 | deleterious | D | 0.637575479 | None | None | N |
I/P | 0.9929 | likely_pathogenic | 0.9936 | pathogenic | -1.556 | Destabilizing | 0.944 | D | 0.797 | deleterious | None | None | None | None | N |
I/Q | 0.9124 | likely_pathogenic | 0.9117 | pathogenic | -2.036 | Highly Destabilizing | 0.944 | D | 0.801 | deleterious | None | None | None | None | N |
I/R | 0.8505 | likely_pathogenic | 0.8583 | pathogenic | -1.467 | Destabilizing | 0.944 | D | 0.793 | deleterious | None | None | None | None | N |
I/S | 0.864 | likely_pathogenic | 0.8578 | pathogenic | -2.753 | Highly Destabilizing | 0.065 | N | 0.555 | neutral | D | 0.637575479 | None | None | N |
I/T | 0.8869 | likely_pathogenic | 0.8745 | pathogenic | -2.476 | Highly Destabilizing | 0.023 | N | 0.5 | neutral | D | 0.621152509 | None | None | N |
I/V | 0.1589 | likely_benign | 0.1378 | benign | -1.556 | Destabilizing | 0.002 | N | 0.291 | neutral | D | 0.545720434 | None | None | N |
I/W | 0.9451 | likely_pathogenic | 0.9357 | pathogenic | -1.745 | Destabilizing | 0.995 | D | 0.802 | deleterious | None | None | None | None | N |
I/Y | 0.7275 | likely_pathogenic | 0.7491 | pathogenic | -1.531 | Destabilizing | 0.944 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.