Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8233 | 24922;24923;24924 | chr2:178718409;178718408;178718407 | chr2:179583136;179583135;179583134 |
N2AB | 7916 | 23971;23972;23973 | chr2:178718409;178718408;178718407 | chr2:179583136;179583135;179583134 |
N2A | 6989 | 21190;21191;21192 | chr2:178718409;178718408;178718407 | chr2:179583136;179583135;179583134 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.051 | N | 0.247 | 0.289 | 0.242825505644 | gnomAD-4.0.0 | 6.84224E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99489E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1147 | likely_benign | 0.1036 | benign | -0.439 | Destabilizing | 0.007 | N | 0.189 | neutral | None | None | None | None | N |
S/C | 0.1619 | likely_benign | 0.1566 | benign | -1.002 | Destabilizing | 0.997 | D | 0.586 | neutral | N | 0.489826055 | None | None | N |
S/D | 0.9196 | likely_pathogenic | 0.9237 | pathogenic | -2.017 | Highly Destabilizing | 0.016 | N | 0.225 | neutral | None | None | None | None | N |
S/E | 0.9651 | likely_pathogenic | 0.9637 | pathogenic | -1.938 | Destabilizing | 0.525 | D | 0.485 | neutral | None | None | None | None | N |
S/F | 0.9328 | likely_pathogenic | 0.9282 | pathogenic | -0.854 | Destabilizing | 0.991 | D | 0.638 | neutral | None | None | None | None | N |
S/G | 0.1558 | likely_benign | 0.1595 | benign | -0.671 | Destabilizing | 0.454 | N | 0.459 | neutral | N | 0.507355437 | None | None | N |
S/H | 0.9322 | likely_pathogenic | 0.9317 | pathogenic | -1.19 | Destabilizing | 0.974 | D | 0.609 | neutral | None | None | None | None | N |
S/I | 0.6322 | likely_pathogenic | 0.575 | pathogenic | 0.083 | Stabilizing | 0.934 | D | 0.644 | neutral | N | 0.483702585 | None | None | N |
S/K | 0.9908 | likely_pathogenic | 0.9904 | pathogenic | -0.491 | Destabilizing | 0.842 | D | 0.509 | neutral | None | None | None | None | N |
S/L | 0.5042 | ambiguous | 0.4687 | ambiguous | 0.083 | Stabilizing | 0.842 | D | 0.557 | neutral | None | None | None | None | N |
S/M | 0.6636 | likely_pathogenic | 0.6334 | pathogenic | 0.114 | Stabilizing | 0.998 | D | 0.601 | neutral | None | None | None | None | N |
S/N | 0.4238 | ambiguous | 0.477 | ambiguous | -1.081 | Destabilizing | 0.051 | N | 0.247 | neutral | N | 0.518876327 | None | None | N |
S/P | 0.6869 | likely_pathogenic | 0.6386 | pathogenic | -0.059 | Destabilizing | 0.974 | D | 0.631 | neutral | None | None | None | None | N |
S/Q | 0.9613 | likely_pathogenic | 0.9579 | pathogenic | -1.221 | Destabilizing | 0.974 | D | 0.607 | neutral | None | None | None | None | N |
S/R | 0.9851 | likely_pathogenic | 0.9839 | pathogenic | -0.456 | Destabilizing | 0.966 | D | 0.635 | neutral | N | 0.518876327 | None | None | N |
S/T | 0.1472 | likely_benign | 0.1382 | benign | -0.73 | Destabilizing | 0.051 | N | 0.222 | neutral | N | 0.497290745 | None | None | N |
S/V | 0.5066 | ambiguous | 0.4303 | ambiguous | -0.059 | Destabilizing | 0.728 | D | 0.562 | neutral | None | None | None | None | N |
S/W | 0.9619 | likely_pathogenic | 0.9554 | pathogenic | -1.077 | Destabilizing | 0.998 | D | 0.629 | neutral | None | None | None | None | N |
S/Y | 0.8726 | likely_pathogenic | 0.8803 | pathogenic | -0.595 | Destabilizing | 0.991 | D | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.