Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8257 | 24994;24995;24996 | chr2:178718337;178718336;178718335 | chr2:179583064;179583063;179583062 |
N2AB | 7940 | 24043;24044;24045 | chr2:178718337;178718336;178718335 | chr2:179583064;179583063;179583062 |
N2A | 7013 | 21262;21263;21264 | chr2:178718337;178718336;178718335 | chr2:179583064;179583063;179583062 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs371322658 | -0.799 | None | N | 0.181 | 0.083 | None | gnomAD-2.1.1 | 2.86E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.27E-05 | 0 |
L/V | rs371322658 | -0.799 | None | N | 0.181 | 0.083 | None | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 8.82E-05 | 0 | 0 |
L/V | rs371322658 | -0.799 | None | N | 0.181 | 0.083 | None | gnomAD-4.0.0 | 3.09921E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.2389E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1337 | likely_benign | 0.1497 | benign | -1.784 | Destabilizing | 0.035 | N | 0.479 | neutral | None | None | None | None | N |
L/C | 0.5096 | ambiguous | 0.5469 | ambiguous | -1.123 | Destabilizing | 0.824 | D | 0.587 | neutral | None | None | None | None | N |
L/D | 0.3938 | ambiguous | 0.4564 | ambiguous | -1.033 | Destabilizing | 0.081 | N | 0.635 | neutral | None | None | None | None | N |
L/E | 0.1748 | likely_benign | 0.196 | benign | -1.007 | Destabilizing | 0.002 | N | 0.403 | neutral | None | None | None | None | N |
L/F | 0.1087 | likely_benign | 0.1177 | benign | -1.274 | Destabilizing | 0.38 | N | 0.591 | neutral | None | None | None | None | N |
L/G | 0.3976 | ambiguous | 0.4347 | ambiguous | -2.129 | Highly Destabilizing | 0.262 | N | 0.643 | neutral | None | None | None | None | N |
L/H | 0.1419 | likely_benign | 0.1499 | benign | -1.276 | Destabilizing | 0.555 | D | 0.635 | neutral | None | None | None | None | N |
L/I | 0.077 | likely_benign | 0.089 | benign | -0.897 | Destabilizing | 0.029 | N | 0.463 | neutral | None | None | None | None | N |
L/K | 0.1196 | likely_benign | 0.1455 | benign | -1.05 | Destabilizing | 0.081 | N | 0.645 | neutral | None | None | None | None | N |
L/M | 0.0953 | likely_benign | 0.0981 | benign | -0.698 | Destabilizing | 0.317 | N | 0.583 | neutral | N | 0.498961646 | None | None | N |
L/N | 0.1845 | likely_benign | 0.2274 | benign | -0.908 | Destabilizing | 0.555 | D | 0.67 | neutral | None | None | None | None | N |
L/P | 0.5291 | ambiguous | 0.5765 | pathogenic | -1.162 | Destabilizing | None | N | 0.423 | neutral | N | 0.498708157 | None | None | N |
L/Q | 0.0916 | likely_benign | 0.0996 | benign | -1.075 | Destabilizing | 0.012 | N | 0.381 | neutral | N | 0.453326537 | None | None | N |
L/R | 0.1057 | likely_benign | 0.1154 | benign | -0.481 | Destabilizing | 0.317 | N | 0.667 | neutral | N | 0.450440948 | None | None | N |
L/S | 0.1367 | likely_benign | 0.1595 | benign | -1.618 | Destabilizing | 0.081 | N | 0.613 | neutral | None | None | None | None | N |
L/T | 0.1086 | likely_benign | 0.1236 | benign | -1.471 | Destabilizing | 0.002 | N | 0.225 | neutral | None | None | None | None | N |
L/V | 0.0744 | likely_benign | 0.0793 | benign | -1.162 | Destabilizing | None | N | 0.181 | neutral | N | 0.498098822 | None | None | N |
L/W | 0.204 | likely_benign | 0.201 | benign | -1.329 | Destabilizing | 0.935 | D | 0.623 | neutral | None | None | None | None | N |
L/Y | 0.2529 | likely_benign | 0.275 | benign | -1.096 | Destabilizing | 0.555 | D | 0.641 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.