Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8274 | 25045;25046;25047 | chr2:178718186;178718185;178718184 | chr2:179582913;179582912;179582911 |
N2AB | 7957 | 24094;24095;24096 | chr2:178718186;178718185;178718184 | chr2:179582913;179582912;179582911 |
N2A | 7030 | 21313;21314;21315 | chr2:178718186;178718185;178718184 | chr2:179582913;179582912;179582911 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs72648981 | 0.792 | 0.967 | N | 0.604 | 0.248 | None | gnomAD-2.1.1 | 2.30508E-03 | None | None | None | None | I | None | 4.97471E-04 | 7.95635E-04 | None | 1.16822E-03 | 0 | None | 0 | None | 4.02228E-03 | 3.75627E-03 | 2.9855E-03 |
E/K | rs72648981 | 0.792 | 0.967 | N | 0.604 | 0.248 | None | gnomAD-3.1.2 | 2.32668E-03 | None | None | None | None | I | None | 6.75774E-04 | 1.17878E-03 | 0 | 5.76701E-04 | 0 | None | 3.9548E-03 | 0 | 3.82241E-03 | 0 | 1.91022E-03 |
E/K | rs72648981 | 0.792 | 0.967 | N | 0.604 | 0.248 | None | 1000 genomes | 5.99042E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 0 | 3E-03 | None | None | None | 0 | None |
E/K | rs72648981 | 0.792 | 0.967 | N | 0.604 | 0.248 | None | gnomAD-4.0.0 | 2.97975E-03 | None | None | None | None | I | None | 5.33988E-04 | 8.52016E-04 | None | 8.12623E-04 | 0 | None | 3.21302E-03 | 0 | 3.69014E-03 | 0 | 2.16485E-03 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1947 | likely_benign | 0.2035 | benign | -0.443 | Destabilizing | 0.97 | D | 0.611 | neutral | N | 0.477302262 | None | None | I |
E/C | 0.9027 | likely_pathogenic | 0.9188 | pathogenic | -0.203 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
E/D | 0.1988 | likely_benign | 0.214 | benign | -0.466 | Destabilizing | 0.805 | D | 0.556 | neutral | N | 0.438842661 | None | None | I |
E/F | 0.7967 | likely_pathogenic | 0.8256 | pathogenic | -0.18 | Destabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | I |
E/G | 0.2843 | likely_benign | 0.3374 | benign | -0.665 | Destabilizing | 0.995 | D | 0.537 | neutral | N | 0.51586065 | None | None | I |
E/H | 0.5054 | ambiguous | 0.5337 | ambiguous | 0.087 | Stabilizing | 0.999 | D | 0.553 | neutral | None | None | None | None | I |
E/I | 0.4359 | ambiguous | 0.4391 | ambiguous | 0.12 | Stabilizing | 0.949 | D | 0.561 | neutral | None | None | None | None | I |
E/K | 0.1874 | likely_benign | 0.2075 | benign | 0.211 | Stabilizing | 0.967 | D | 0.604 | neutral | N | 0.447152713 | None | None | I |
E/L | 0.4773 | ambiguous | 0.4881 | ambiguous | 0.12 | Stabilizing | 0.949 | D | 0.584 | neutral | None | None | None | None | I |
E/M | 0.5329 | ambiguous | 0.5406 | ambiguous | 0.148 | Stabilizing | 0.994 | D | 0.637 | neutral | None | None | None | None | I |
E/N | 0.355 | ambiguous | 0.3607 | ambiguous | -0.22 | Destabilizing | 0.992 | D | 0.567 | neutral | None | None | None | None | I |
E/P | 0.6985 | likely_pathogenic | 0.7022 | pathogenic | -0.047 | Destabilizing | 0.992 | D | 0.585 | neutral | None | None | None | None | I |
E/Q | 0.1682 | likely_benign | 0.1684 | benign | -0.171 | Destabilizing | 0.793 | D | 0.24 | neutral | N | 0.43257005 | None | None | I |
E/R | 0.3226 | likely_benign | 0.3588 | ambiguous | 0.503 | Stabilizing | 0.996 | D | 0.561 | neutral | None | None | None | None | I |
E/S | 0.2449 | likely_benign | 0.2464 | benign | -0.376 | Destabilizing | 0.977 | D | 0.555 | neutral | None | None | None | None | I |
E/T | 0.2348 | likely_benign | 0.2314 | benign | -0.192 | Destabilizing | 0.983 | D | 0.569 | neutral | None | None | None | None | I |
E/V | 0.232 | likely_benign | 0.2342 | benign | -0.047 | Destabilizing | 0.209 | N | 0.315 | neutral | N | 0.450499663 | None | None | I |
E/W | 0.9178 | likely_pathogenic | 0.9375 | pathogenic | 0.017 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
E/Y | 0.7068 | likely_pathogenic | 0.7466 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.