Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8275 | 25048;25049;25050 | chr2:178718183;178718182;178718181 | chr2:179582910;179582909;179582908 |
N2AB | 7958 | 24097;24098;24099 | chr2:178718183;178718182;178718181 | chr2:179582910;179582909;179582908 |
N2A | 7031 | 21316;21317;21318 | chr2:178718183;178718182;178718181 | chr2:179582910;179582909;179582908 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs771947778 | -1.281 | 0.01 | N | 0.149 | 0.216 | 0.300449992093 | gnomAD-2.1.1 | 4.13E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.29E-05 | None | 0 | 0 | 0 |
A/T | rs771947778 | -1.281 | 0.01 | N | 0.149 | 0.216 | 0.300449992093 | gnomAD-4.0.0 | 1.10167E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.17018E-05 | 3.48554E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5739 | likely_pathogenic | 0.5324 | ambiguous | -0.909 | Destabilizing | 0.966 | D | 0.541 | neutral | None | None | None | None | I |
A/D | 0.5305 | ambiguous | 0.5873 | pathogenic | -1.583 | Destabilizing | 0.758 | D | 0.599 | neutral | None | None | None | None | I |
A/E | 0.4504 | ambiguous | 0.5197 | ambiguous | -1.566 | Destabilizing | 0.99 | D | 0.531 | neutral | N | 0.491585494 | None | None | I |
A/F | 0.5138 | ambiguous | 0.5454 | ambiguous | -0.908 | Destabilizing | 0.981 | D | 0.606 | neutral | None | None | None | None | I |
A/G | 0.1988 | likely_benign | 0.1972 | benign | -1.328 | Destabilizing | None | N | 0.16 | neutral | N | 0.511358907 | None | None | I |
A/H | 0.7113 | likely_pathogenic | 0.7457 | pathogenic | -1.579 | Destabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | I |
A/I | 0.2779 | likely_benign | 0.2649 | benign | -0.294 | Destabilizing | 0.514 | D | 0.461 | neutral | None | None | None | None | I |
A/K | 0.6467 | likely_pathogenic | 0.6873 | pathogenic | -1.412 | Destabilizing | 0.997 | D | 0.53 | neutral | None | None | None | None | I |
A/L | 0.2617 | likely_benign | 0.2782 | benign | -0.294 | Destabilizing | 0.019 | N | 0.272 | neutral | None | None | None | None | I |
A/M | 0.2619 | likely_benign | 0.2611 | benign | -0.251 | Destabilizing | 0.981 | D | 0.591 | neutral | None | None | None | None | I |
A/N | 0.4815 | ambiguous | 0.5012 | ambiguous | -1.183 | Destabilizing | 0.269 | N | 0.617 | neutral | None | None | None | None | I |
A/P | 0.7811 | likely_pathogenic | 0.8249 | pathogenic | -0.493 | Destabilizing | 0.004 | N | 0.293 | neutral | N | 0.507968229 | None | None | I |
A/Q | 0.5736 | likely_pathogenic | 0.6121 | pathogenic | -1.279 | Destabilizing | 0.992 | D | 0.6 | neutral | None | None | None | None | I |
A/R | 0.5825 | likely_pathogenic | 0.6376 | pathogenic | -1.111 | Destabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | I |
A/S | 0.1432 | likely_benign | 0.1424 | benign | -1.529 | Destabilizing | 0.018 | N | 0.413 | neutral | N | 0.485865817 | None | None | I |
A/T | 0.0954 | likely_benign | 0.0888 | benign | -1.421 | Destabilizing | 0.01 | N | 0.149 | neutral | N | 0.494599943 | None | None | I |
A/V | 0.1042 | likely_benign | 0.0991 | benign | -0.493 | Destabilizing | 0.002 | N | 0.124 | neutral | N | 0.397681111 | None | None | I |
A/W | 0.8582 | likely_pathogenic | 0.8794 | pathogenic | -1.371 | Destabilizing | 0.999 | D | 0.584 | neutral | None | None | None | None | I |
A/Y | 0.6516 | likely_pathogenic | 0.6875 | pathogenic | -0.949 | Destabilizing | 0.991 | D | 0.586 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.