Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8291 | 25096;25097;25098 | chr2:178718135;178718134;178718133 | chr2:179582862;179582861;179582860 |
N2AB | 7974 | 24145;24146;24147 | chr2:178718135;178718134;178718133 | chr2:179582862;179582861;179582860 |
N2A | 7047 | 21364;21365;21366 | chr2:178718135;178718134;178718133 | chr2:179582862;179582861;179582860 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.992 | D | 0.714 | 0.576 | 0.761910172549 | gnomAD-4.0.0 | 1.60168E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 2.03252E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.7233 | likely_pathogenic | 0.8822 | pathogenic | -0.578 | Destabilizing | 0.958 | D | 0.545 | neutral | N | 0.509282719 | None | None | I |
P/C | 0.9916 | likely_pathogenic | 0.9971 | pathogenic | -0.619 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
P/D | 0.9743 | likely_pathogenic | 0.9902 | pathogenic | -0.42 | Destabilizing | 0.981 | D | 0.707 | prob.neutral | None | None | None | None | I |
P/E | 0.9477 | likely_pathogenic | 0.9768 | pathogenic | -0.542 | Destabilizing | 0.988 | D | 0.711 | prob.delet. | None | None | None | None | I |
P/F | 0.9964 | likely_pathogenic | 0.9986 | pathogenic | -0.806 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
P/G | 0.8874 | likely_pathogenic | 0.9691 | pathogenic | -0.711 | Destabilizing | 0.993 | D | 0.646 | neutral | None | None | None | None | I |
P/H | 0.9688 | likely_pathogenic | 0.9887 | pathogenic | -0.282 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
P/I | 0.9858 | likely_pathogenic | 0.9915 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
P/K | 0.9703 | likely_pathogenic | 0.9871 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
P/L | 0.9243 | likely_pathogenic | 0.9672 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | D | 0.588561966 | None | None | I |
P/M | 0.98 | likely_pathogenic | 0.991 | pathogenic | -0.363 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
P/N | 0.9687 | likely_pathogenic | 0.9898 | pathogenic | -0.224 | Destabilizing | 0.997 | D | 0.69 | prob.neutral | None | None | None | None | I |
P/Q | 0.9382 | likely_pathogenic | 0.9751 | pathogenic | -0.5 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | N | 0.509282719 | None | None | I |
P/R | 0.9359 | likely_pathogenic | 0.9709 | pathogenic | 0.037 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | D | 0.581657748 | None | None | I |
P/S | 0.8763 | likely_pathogenic | 0.9626 | pathogenic | -0.575 | Destabilizing | 0.934 | D | 0.337 | neutral | D | 0.54103423 | None | None | I |
P/T | 0.8405 | likely_pathogenic | 0.9288 | pathogenic | -0.599 | Destabilizing | 0.992 | D | 0.714 | prob.delet. | D | 0.613696469 | None | None | I |
P/V | 0.9551 | likely_pathogenic | 0.9728 | pathogenic | -0.412 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | I |
P/W | 0.9974 | likely_pathogenic | 0.9988 | pathogenic | -0.868 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
P/Y | 0.9943 | likely_pathogenic | 0.9977 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.