Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8295 | 25108;25109;25110 | chr2:178718123;178718122;178718121 | chr2:179582850;179582849;179582848 |
N2AB | 7978 | 24157;24158;24159 | chr2:178718123;178718122;178718121 | chr2:179582850;179582849;179582848 |
N2A | 7051 | 21376;21377;21378 | chr2:178718123;178718122;178718121 | chr2:179582850;179582849;179582848 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | rs752786293 | -1.373 | 0.965 | D | 0.845 | 0.658 | 0.899350334792 | gnomAD-2.1.1 | 8.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
I/N | rs752786293 | -1.373 | 0.965 | D | 0.845 | 0.658 | 0.899350334792 | gnomAD-4.0.0 | 6.38857E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.73197E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9335 | likely_pathogenic | 0.9474 | pathogenic | -2.056 | Highly Destabilizing | 0.513 | D | 0.585 | neutral | None | None | None | None | N |
I/C | 0.9439 | likely_pathogenic | 0.9473 | pathogenic | -1.27 | Destabilizing | 0.993 | D | 0.749 | deleterious | None | None | None | None | N |
I/D | 0.9937 | likely_pathogenic | 0.997 | pathogenic | -1.693 | Destabilizing | 0.973 | D | 0.821 | deleterious | None | None | None | None | N |
I/E | 0.9879 | likely_pathogenic | 0.9934 | pathogenic | -1.555 | Destabilizing | 0.964 | D | 0.823 | deleterious | None | None | None | None | N |
I/F | 0.5361 | ambiguous | 0.5375 | ambiguous | -1.203 | Destabilizing | 0.843 | D | 0.688 | prob.neutral | N | 0.498692746 | None | None | N |
I/G | 0.9841 | likely_pathogenic | 0.9893 | pathogenic | -2.527 | Highly Destabilizing | 0.912 | D | 0.819 | deleterious | None | None | None | None | N |
I/H | 0.9814 | likely_pathogenic | 0.9878 | pathogenic | -1.831 | Destabilizing | 0.994 | D | 0.846 | deleterious | None | None | None | None | N |
I/K | 0.9701 | likely_pathogenic | 0.9827 | pathogenic | -1.452 | Destabilizing | 0.345 | N | 0.823 | deleterious | None | None | None | None | N |
I/L | 0.3039 | likely_benign | 0.3223 | benign | -0.754 | Destabilizing | 0.01 | N | 0.488 | neutral | D | 0.540105734 | None | None | N |
I/M | 0.3689 | ambiguous | 0.3811 | ambiguous | -0.62 | Destabilizing | 0.618 | D | 0.649 | neutral | N | 0.496415022 | None | None | N |
I/N | 0.9307 | likely_pathogenic | 0.9586 | pathogenic | -1.502 | Destabilizing | 0.965 | D | 0.845 | deleterious | D | 0.530990917 | None | None | N |
I/P | 0.9565 | likely_pathogenic | 0.9799 | pathogenic | -1.162 | Destabilizing | 0.991 | D | 0.841 | deleterious | None | None | None | None | N |
I/Q | 0.978 | likely_pathogenic | 0.986 | pathogenic | -1.485 | Destabilizing | 0.979 | D | 0.844 | deleterious | None | None | None | None | N |
I/R | 0.963 | likely_pathogenic | 0.978 | pathogenic | -1.069 | Destabilizing | 0.935 | D | 0.848 | deleterious | None | None | None | None | N |
I/S | 0.9378 | likely_pathogenic | 0.9595 | pathogenic | -2.227 | Highly Destabilizing | 0.659 | D | 0.791 | deleterious | D | 0.542093733 | None | None | N |
I/T | 0.8835 | likely_pathogenic | 0.9076 | pathogenic | -1.949 | Destabilizing | 0.015 | N | 0.471 | neutral | N | 0.517152623 | None | None | N |
I/V | 0.1015 | likely_benign | 0.1051 | benign | -1.162 | Destabilizing | None | N | 0.227 | neutral | N | 0.425363571 | None | None | N |
I/W | 0.9799 | likely_pathogenic | 0.9845 | pathogenic | -1.453 | Destabilizing | 0.998 | D | 0.848 | deleterious | None | None | None | None | N |
I/Y | 0.9204 | likely_pathogenic | 0.9352 | pathogenic | -1.172 | Destabilizing | 0.629 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.