Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8300 | 25123;25124;25125 | chr2:178718108;178718107;178718106 | chr2:179582835;179582834;179582833 |
N2AB | 7983 | 24172;24173;24174 | chr2:178718108;178718107;178718106 | chr2:179582835;179582834;179582833 |
N2A | 7056 | 21391;21392;21393 | chr2:178718108;178718107;178718106 | chr2:179582835;179582834;179582833 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1438429191 | 0.092 | None | N | 0.123 | 0.14 | 0.0297737177859 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/D | rs1438429191 | 0.092 | None | N | 0.123 | 0.14 | 0.0297737177859 | gnomAD-4.0.0 | 6.8472E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15942E-05 | 0 |
E/K | rs1300968279 | None | 0.236 | N | 0.285 | 0.359 | 0.32980341726 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1300968279 | None | 0.236 | N | 0.285 | 0.359 | 0.32980341726 | gnomAD-4.0.0 | 6.57583E-06 | None | None | None | None | N | None | 2.41546E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs1300968279 | 0.28 | 0.52 | N | 0.315 | 0.318 | 0.257292322809 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs1300968279 | 0.28 | 0.52 | N | 0.315 | 0.318 | 0.257292322809 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs1300968279 | 0.28 | 0.52 | N | 0.315 | 0.318 | 0.257292322809 | gnomAD-4.0.0 | 5.13343E-06 | None | None | None | None | N | None | 0 | 6.77897E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1723 | likely_benign | 0.2019 | benign | -0.345 | Destabilizing | 0.002 | N | 0.183 | neutral | N | 0.463202388 | None | None | N |
E/C | 0.8749 | likely_pathogenic | 0.9016 | pathogenic | -0.012 | Destabilizing | 0.978 | D | 0.365 | neutral | None | None | None | None | N |
E/D | 0.1 | likely_benign | 0.1174 | benign | -0.265 | Destabilizing | None | N | 0.123 | neutral | N | 0.339483743 | None | None | N |
E/F | 0.8479 | likely_pathogenic | 0.8866 | pathogenic | -0.3 | Destabilizing | 0.955 | D | 0.387 | neutral | None | None | None | None | N |
E/G | 0.0728 | likely_benign | 0.0711 | benign | -0.551 | Destabilizing | 0.001 | N | 0.199 | neutral | N | 0.414619007 | None | None | N |
E/H | 0.5699 | likely_pathogenic | 0.6492 | pathogenic | -0.198 | Destabilizing | 0.939 | D | 0.281 | neutral | None | None | None | None | N |
E/I | 0.7025 | likely_pathogenic | 0.7817 | pathogenic | 0.163 | Stabilizing | 0.767 | D | 0.417 | neutral | None | None | None | None | N |
E/K | 0.2401 | likely_benign | 0.3057 | benign | 0.131 | Stabilizing | 0.236 | N | 0.285 | neutral | N | 0.459546007 | None | None | N |
E/L | 0.5669 | likely_pathogenic | 0.649 | pathogenic | 0.163 | Stabilizing | 0.317 | N | 0.458 | neutral | None | None | None | None | N |
E/M | 0.6372 | likely_pathogenic | 0.7091 | pathogenic | 0.279 | Stabilizing | 0.872 | D | 0.367 | neutral | None | None | None | None | N |
E/N | 0.1972 | likely_benign | 0.2308 | benign | 0.001 | Stabilizing | 0.097 | N | 0.261 | neutral | None | None | None | None | N |
E/P | 0.8825 | likely_pathogenic | 0.9069 | pathogenic | 0.014 | Stabilizing | 0.123 | N | 0.419 | neutral | None | None | None | None | N |
E/Q | 0.1641 | likely_benign | 0.1896 | benign | 0.035 | Stabilizing | 0.52 | D | 0.315 | neutral | N | 0.495160091 | None | None | N |
E/R | 0.3495 | ambiguous | 0.4195 | ambiguous | 0.314 | Stabilizing | 0.668 | D | 0.281 | neutral | None | None | None | None | N |
E/S | 0.2054 | likely_benign | 0.2352 | benign | -0.217 | Destabilizing | 0.099 | N | 0.289 | neutral | None | None | None | None | N |
E/T | 0.4167 | ambiguous | 0.5106 | ambiguous | -0.061 | Destabilizing | 0.425 | N | 0.393 | neutral | None | None | None | None | N |
E/V | 0.4755 | ambiguous | 0.5719 | pathogenic | 0.014 | Stabilizing | 0.199 | N | 0.459 | neutral | N | 0.48265494 | None | None | N |
E/W | 0.9315 | likely_pathogenic | 0.9497 | pathogenic | -0.2 | Destabilizing | 0.995 | D | 0.379 | neutral | None | None | None | None | N |
E/Y | 0.6736 | likely_pathogenic | 0.7416 | pathogenic | -0.081 | Destabilizing | 0.983 | D | 0.381 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.