Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8306 | 25141;25142;25143 | chr2:178718090;178718089;178718088 | chr2:179582817;179582816;179582815 |
N2AB | 7989 | 24190;24191;24192 | chr2:178718090;178718089;178718088 | chr2:179582817;179582816;179582815 |
N2A | 7062 | 21409;21410;21411 | chr2:178718090;178718089;178718088 | chr2:179582817;179582816;179582815 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs776712129 | 0.228 | 0.932 | D | 0.428 | 0.48 | 0.71767939224 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
S/L | rs776712129 | 0.228 | 0.932 | D | 0.428 | 0.48 | 0.71767939224 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/L | rs776712129 | 0.228 | 0.932 | D | 0.428 | 0.48 | 0.71767939224 | gnomAD-4.0.0 | 1.36365E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.22826E-05 | None | 0 | 0 | 1.78009E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0826 | likely_benign | 0.0852 | benign | -0.115 | Destabilizing | 0.004 | N | 0.146 | neutral | N | 0.482209436 | None | None | N |
S/C | 0.2703 | likely_benign | 0.2963 | benign | -0.259 | Destabilizing | 0.997 | D | 0.496 | neutral | None | None | None | None | N |
S/D | 0.614 | likely_pathogenic | 0.7057 | pathogenic | -0.01 | Destabilizing | 0.907 | D | 0.408 | neutral | None | None | None | None | N |
S/E | 0.7199 | likely_pathogenic | 0.7663 | pathogenic | -0.107 | Destabilizing | 0.932 | D | 0.399 | neutral | None | None | None | None | N |
S/F | 0.317 | likely_benign | 0.3834 | ambiguous | -0.733 | Destabilizing | 0.997 | D | 0.522 | neutral | None | None | None | None | N |
S/G | 0.1275 | likely_benign | 0.1669 | benign | -0.208 | Destabilizing | 0.027 | N | 0.126 | neutral | None | None | None | None | N |
S/H | 0.5562 | ambiguous | 0.6518 | pathogenic | -0.63 | Destabilizing | 0.999 | D | 0.488 | neutral | None | None | None | None | N |
S/I | 0.252 | likely_benign | 0.3136 | benign | -0.004 | Destabilizing | 0.992 | D | 0.517 | neutral | None | None | None | None | N |
S/K | 0.8611 | likely_pathogenic | 0.9136 | pathogenic | -0.493 | Destabilizing | 0.973 | D | 0.405 | neutral | None | None | None | None | N |
S/L | 0.1327 | likely_benign | 0.1531 | benign | -0.004 | Destabilizing | 0.932 | D | 0.428 | neutral | D | 0.530560744 | None | None | N |
S/M | 0.2685 | likely_benign | 0.3059 | benign | -0.016 | Destabilizing | 0.999 | D | 0.487 | neutral | None | None | None | None | N |
S/N | 0.1977 | likely_benign | 0.2541 | benign | -0.147 | Destabilizing | 0.534 | D | 0.446 | neutral | None | None | None | None | N |
S/P | 0.1285 | likely_benign | 0.1387 | benign | -0.013 | Destabilizing | 0.011 | N | 0.225 | neutral | N | 0.469280211 | None | None | N |
S/Q | 0.6523 | likely_pathogenic | 0.7205 | pathogenic | -0.369 | Destabilizing | 0.997 | D | 0.47 | neutral | None | None | None | None | N |
S/R | 0.8199 | likely_pathogenic | 0.8857 | pathogenic | -0.259 | Destabilizing | 0.992 | D | 0.466 | neutral | None | None | None | None | N |
S/T | 0.1126 | likely_benign | 0.13 | benign | -0.216 | Destabilizing | 0.299 | N | 0.407 | neutral | N | 0.48803933 | None | None | N |
S/V | 0.2278 | likely_benign | 0.2723 | benign | -0.013 | Destabilizing | 0.871 | D | 0.433 | neutral | None | None | None | None | N |
S/W | 0.4759 | ambiguous | 0.5624 | ambiguous | -0.826 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | N |
S/Y | 0.2921 | likely_benign | 0.3531 | ambiguous | -0.518 | Destabilizing | 0.997 | D | 0.519 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.