Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8307 | 25144;25145;25146 | chr2:178718087;178718086;178718085 | chr2:179582814;179582813;179582812 |
N2AB | 7990 | 24193;24194;24195 | chr2:178718087;178718086;178718085 | chr2:179582814;179582813;179582812 |
N2A | 7063 | 21412;21413;21414 | chr2:178718087;178718086;178718085 | chr2:179582814;179582813;179582812 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | rs2077769834 | None | None | N | 0.106 | 0.216 | 0.295974979623 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6278 | likely_pathogenic | 0.6965 | pathogenic | -0.725 | Destabilizing | 0.996 | D | 0.334 | neutral | None | None | None | None | N |
A/D | 0.4231 | ambiguous | 0.5725 | pathogenic | -0.42 | Destabilizing | 0.7 | D | 0.414 | neutral | N | 0.407711678 | None | None | N |
A/E | 0.4279 | ambiguous | 0.5506 | ambiguous | -0.55 | Destabilizing | 0.812 | D | 0.383 | neutral | None | None | None | None | N |
A/F | 0.3985 | ambiguous | 0.4784 | ambiguous | -0.811 | Destabilizing | 0.988 | D | 0.413 | neutral | None | None | None | None | N |
A/G | 0.1604 | likely_benign | 0.2219 | benign | -0.373 | Destabilizing | None | N | 0.106 | neutral | N | 0.344814992 | None | None | N |
A/H | 0.5331 | ambiguous | 0.6372 | pathogenic | -0.372 | Destabilizing | 0.996 | D | 0.369 | neutral | None | None | None | None | N |
A/I | 0.3251 | likely_benign | 0.4098 | ambiguous | -0.283 | Destabilizing | 0.976 | D | 0.395 | neutral | None | None | None | None | N |
A/K | 0.6528 | likely_pathogenic | 0.7777 | pathogenic | -0.675 | Destabilizing | 0.92 | D | 0.381 | neutral | None | None | None | None | N |
A/L | 0.1913 | likely_benign | 0.245 | benign | -0.283 | Destabilizing | 0.852 | D | 0.367 | neutral | None | None | None | None | N |
A/M | 0.2667 | likely_benign | 0.3317 | benign | -0.454 | Destabilizing | 0.996 | D | 0.318 | neutral | None | None | None | None | N |
A/N | 0.2733 | likely_benign | 0.3672 | ambiguous | -0.345 | Destabilizing | 0.266 | N | 0.402 | neutral | None | None | None | None | N |
A/P | 0.5621 | ambiguous | 0.6959 | pathogenic | -0.253 | Destabilizing | 0.825 | D | 0.419 | neutral | N | 0.474168743 | None | None | N |
A/Q | 0.4476 | ambiguous | 0.5467 | ambiguous | -0.574 | Destabilizing | 0.976 | D | 0.369 | neutral | None | None | None | None | N |
A/R | 0.6083 | likely_pathogenic | 0.7234 | pathogenic | -0.245 | Destabilizing | 0.976 | D | 0.389 | neutral | None | None | None | None | N |
A/S | 0.0805 | likely_benign | 0.0907 | benign | -0.559 | Destabilizing | 0.001 | N | 0.119 | neutral | N | 0.341369255 | None | None | N |
A/T | 0.0863 | likely_benign | 0.1023 | benign | -0.603 | Destabilizing | 0.009 | N | 0.126 | neutral | N | 0.39636132 | None | None | N |
A/V | 0.1601 | likely_benign | 0.205 | benign | -0.253 | Destabilizing | 0.62 | D | 0.341 | neutral | N | 0.468146848 | None | None | N |
A/W | 0.8309 | likely_pathogenic | 0.8914 | pathogenic | -0.982 | Destabilizing | 0.999 | D | 0.445 | neutral | None | None | None | None | N |
A/Y | 0.5767 | likely_pathogenic | 0.6659 | pathogenic | -0.63 | Destabilizing | 0.996 | D | 0.393 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.