Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8324 | 25195;25196;25197 | chr2:178718036;178718035;178718034 | chr2:179582763;179582762;179582761 |
N2AB | 8007 | 24244;24245;24246 | chr2:178718036;178718035;178718034 | chr2:179582763;179582762;179582761 |
N2A | 7080 | 21463;21464;21465 | chr2:178718036;178718035;178718034 | chr2:179582763;179582762;179582761 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs879030954 | None | 0.023 | N | 0.05 | 0.102 | 0.126345400529 | gnomAD-4.0.0 | 4.10537E-06 | None | None | None | None | I | None | 0 | 2.23614E-05 | None | 0 | 0 | None | 0 | 0 | 4.49757E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2118 | likely_benign | 0.2504 | benign | -0.619 | Destabilizing | 0.013 | N | 0.243 | neutral | None | None | None | None | I |
N/C | 0.3454 | ambiguous | 0.4106 | ambiguous | 0.206 | Stabilizing | 0.005 | N | 0.283 | neutral | None | None | None | None | I |
N/D | 0.1756 | likely_benign | 0.1854 | benign | 0.038 | Stabilizing | 0.123 | N | 0.191 | neutral | N | 0.483668087 | None | None | I |
N/E | 0.4003 | ambiguous | 0.4363 | ambiguous | 0.078 | Stabilizing | 0.236 | N | 0.174 | neutral | None | None | None | None | I |
N/F | 0.5604 | ambiguous | 0.6185 | pathogenic | -0.583 | Destabilizing | 0.848 | D | 0.48 | neutral | None | None | None | None | I |
N/G | 0.2116 | likely_benign | 0.2535 | benign | -0.9 | Destabilizing | 0.437 | N | 0.183 | neutral | None | None | None | None | I |
N/H | 0.1103 | likely_benign | 0.1126 | benign | -0.747 | Destabilizing | 0.005 | N | 0.097 | neutral | N | 0.483169441 | None | None | I |
N/I | 0.2737 | likely_benign | 0.3377 | benign | 0.066 | Stabilizing | 0.021 | N | 0.184 | neutral | N | 0.496810742 | None | None | I |
N/K | 0.3636 | ambiguous | 0.3905 | ambiguous | -0.05 | Destabilizing | 0.023 | N | 0.05 | neutral | N | 0.463850175 | None | None | I |
N/L | 0.2285 | likely_benign | 0.2723 | benign | 0.066 | Stabilizing | 0.003 | N | 0.145 | neutral | None | None | None | None | I |
N/M | 0.3573 | ambiguous | 0.4123 | ambiguous | 0.465 | Stabilizing | 0.88 | D | 0.399 | neutral | None | None | None | None | I |
N/P | 0.3347 | likely_benign | 0.3635 | ambiguous | -0.133 | Destabilizing | 0.476 | N | 0.451 | neutral | None | None | None | None | I |
N/Q | 0.3 | likely_benign | 0.3334 | benign | -0.577 | Destabilizing | 0.075 | N | 0.069 | neutral | None | None | None | None | I |
N/R | 0.3592 | ambiguous | 0.3835 | ambiguous | -0.066 | Destabilizing | 0.536 | D | 0.179 | neutral | None | None | None | None | I |
N/S | 0.0704 | likely_benign | 0.0752 | benign | -0.533 | Destabilizing | 0.001 | N | 0.046 | neutral | N | 0.401550923 | None | None | I |
N/T | 0.1256 | likely_benign | 0.1403 | benign | -0.311 | Destabilizing | 0.098 | N | 0.203 | neutral | N | 0.473240449 | None | None | I |
N/V | 0.271 | likely_benign | 0.3297 | benign | -0.133 | Destabilizing | 0.016 | N | 0.332 | neutral | None | None | None | None | I |
N/W | 0.7413 | likely_pathogenic | 0.7705 | pathogenic | -0.398 | Destabilizing | 0.998 | D | 0.375 | neutral | None | None | None | None | I |
N/Y | 0.1892 | likely_benign | 0.2103 | benign | -0.187 | Destabilizing | 0.808 | D | 0.472 | neutral | N | 0.49323172 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.