Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8331 | 25216;25217;25218 | chr2:178718015;178718014;178718013 | chr2:179582742;179582741;179582740 |
N2AB | 8014 | 24265;24266;24267 | chr2:178718015;178718014;178718013 | chr2:179582742;179582741;179582740 |
N2A | 7087 | 21484;21485;21486 | chr2:178718015;178718014;178718013 | chr2:179582742;179582741;179582740 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | rs773888026 | -1.278 | 0.064 | N | 0.544 | 0.235 | 0.55973633643 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
V/E | rs773888026 | -1.278 | 0.064 | N | 0.544 | 0.235 | 0.55973633643 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0933 | likely_benign | 0.0938 | benign | -1.021 | Destabilizing | 0.034 | N | 0.411 | neutral | N | 0.382791803 | None | None | I |
V/C | 0.654 | likely_pathogenic | 0.7423 | pathogenic | -0.79 | Destabilizing | 0.949 | D | 0.527 | neutral | None | None | None | None | I |
V/D | 0.2446 | likely_benign | 0.2499 | benign | -0.451 | Destabilizing | 0.663 | D | 0.607 | neutral | None | None | None | None | I |
V/E | 0.1836 | likely_benign | 0.1846 | benign | -0.505 | Destabilizing | 0.064 | N | 0.544 | neutral | N | 0.411189126 | None | None | I |
V/F | 0.1388 | likely_benign | 0.1563 | benign | -0.92 | Destabilizing | 0.598 | D | 0.558 | neutral | None | None | None | None | I |
V/G | 0.1626 | likely_benign | 0.1784 | benign | -1.27 | Destabilizing | 0.223 | N | 0.581 | neutral | N | 0.408306323 | None | None | I |
V/H | 0.4437 | ambiguous | 0.4914 | ambiguous | -0.753 | Destabilizing | 0.961 | D | 0.603 | neutral | None | None | None | None | I |
V/I | 0.0689 | likely_benign | 0.072 | benign | -0.474 | Destabilizing | None | N | 0.135 | neutral | None | None | None | None | I |
V/K | 0.2406 | likely_benign | 0.2634 | benign | -0.782 | Destabilizing | 0.166 | N | 0.545 | neutral | None | None | None | None | I |
V/L | 0.1609 | likely_benign | 0.1821 | benign | -0.474 | Destabilizing | 0.002 | N | 0.386 | neutral | N | 0.470970935 | None | None | I |
V/M | 0.1052 | likely_benign | 0.1202 | benign | -0.358 | Destabilizing | 0.445 | N | 0.509 | neutral | N | 0.458174996 | None | None | I |
V/N | 0.1996 | likely_benign | 0.2114 | benign | -0.509 | Destabilizing | 0.094 | N | 0.609 | neutral | None | None | None | None | I |
V/P | 0.7116 | likely_pathogenic | 0.779 | pathogenic | -0.62 | Destabilizing | 0.173 | N | 0.581 | neutral | None | None | None | None | I |
V/Q | 0.2406 | likely_benign | 0.2562 | benign | -0.709 | Destabilizing | 0.5 | D | 0.594 | neutral | None | None | None | None | I |
V/R | 0.1995 | likely_benign | 0.2191 | benign | -0.264 | Destabilizing | 0.598 | D | 0.625 | neutral | None | None | None | None | I |
V/S | 0.1181 | likely_benign | 0.1204 | benign | -1.047 | Destabilizing | 0.001 | N | 0.315 | neutral | None | None | None | None | I |
V/T | 0.1049 | likely_benign | 0.1017 | benign | -0.986 | Destabilizing | 0.001 | N | 0.202 | neutral | None | None | None | None | I |
V/W | 0.6779 | likely_pathogenic | 0.7383 | pathogenic | -1.023 | Destabilizing | 0.989 | D | 0.658 | neutral | None | None | None | None | I |
V/Y | 0.4277 | ambiguous | 0.4742 | ambiguous | -0.731 | Destabilizing | 0.751 | D | 0.553 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.