Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8350 | 25273;25274;25275 | chr2:178717958;178717957;178717956 | chr2:179582685;179582684;179582683 |
N2AB | 8033 | 24322;24323;24324 | chr2:178717958;178717957;178717956 | chr2:179582685;179582684;179582683 |
N2A | 7106 | 21541;21542;21543 | chr2:178717958;178717957;178717956 | chr2:179582685;179582684;179582683 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs915984764 | None | 0.174 | N | 0.251 | 0.208 | 0.439339381091 | gnomAD-4.0.0 | 2.0553E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73853E-04 | 9.00722E-07 | 1.16071E-05 | 0 |
V/M | None | None | 0.916 | N | 0.545 | 0.207 | 0.417586769301 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.92456E-04 | None | 0 | 0 | 0 | 0 | 0 |
V/M | None | None | 0.916 | N | 0.545 | 0.207 | 0.417586769301 | gnomAD-4.0.0 | 6.5722E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.92456E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1679 | likely_benign | 0.1849 | benign | -1.365 | Destabilizing | 0.174 | N | 0.251 | neutral | N | 0.416059015 | None | None | I |
V/C | 0.7383 | likely_pathogenic | 0.7753 | pathogenic | -0.894 | Destabilizing | 0.996 | D | 0.533 | neutral | None | None | None | None | I |
V/D | 0.2554 | likely_benign | 0.2827 | benign | -1.079 | Destabilizing | 0.023 | N | 0.398 | neutral | None | None | None | None | I |
V/E | 0.1904 | likely_benign | 0.2051 | benign | -1.085 | Destabilizing | 0.012 | N | 0.341 | neutral | N | 0.4228862 | None | None | I |
V/F | 0.1172 | likely_benign | 0.1245 | benign | -1.04 | Destabilizing | 0.953 | D | 0.573 | neutral | None | None | None | None | I |
V/G | 0.225 | likely_benign | 0.2584 | benign | -1.679 | Destabilizing | 0.763 | D | 0.569 | neutral | D | 0.530421884 | None | None | I |
V/H | 0.3847 | ambiguous | 0.4095 | ambiguous | -1.199 | Destabilizing | 0.989 | D | 0.587 | neutral | None | None | None | None | I |
V/I | 0.0762 | likely_benign | 0.0773 | benign | -0.61 | Destabilizing | 0.091 | N | 0.444 | neutral | None | None | None | None | I |
V/K | 0.2047 | likely_benign | 0.2165 | benign | -1.144 | Destabilizing | 0.729 | D | 0.575 | neutral | None | None | None | None | I |
V/L | 0.1293 | likely_benign | 0.1368 | benign | -0.61 | Destabilizing | None | N | 0.129 | neutral | N | 0.433644698 | None | None | I |
V/M | 0.1106 | likely_benign | 0.1193 | benign | -0.453 | Destabilizing | 0.916 | D | 0.545 | neutral | N | 0.463967605 | None | None | I |
V/N | 0.1933 | likely_benign | 0.201 | benign | -0.914 | Destabilizing | 0.286 | N | 0.599 | neutral | None | None | None | None | I |
V/P | 0.5762 | likely_pathogenic | 0.6182 | pathogenic | -0.826 | Destabilizing | 0.448 | N | 0.629 | neutral | None | None | None | None | I |
V/Q | 0.2046 | likely_benign | 0.2137 | benign | -1.08 | Destabilizing | 0.657 | D | 0.625 | neutral | None | None | None | None | I |
V/R | 0.1901 | likely_benign | 0.208 | benign | -0.624 | Destabilizing | 0.953 | D | 0.625 | neutral | None | None | None | None | I |
V/S | 0.1675 | likely_benign | 0.1816 | benign | -1.446 | Destabilizing | 0.048 | N | 0.317 | neutral | None | None | None | None | I |
V/T | 0.146 | likely_benign | 0.1479 | benign | -1.342 | Destabilizing | 0.016 | N | 0.151 | neutral | None | None | None | None | I |
V/W | 0.6813 | likely_pathogenic | 0.7226 | pathogenic | -1.226 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | I |
V/Y | 0.3928 | ambiguous | 0.4147 | ambiguous | -0.934 | Destabilizing | 0.976 | D | 0.566 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.