Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8370 | 25333;25334;25335 | chr2:178717766;178717765;178717764 | chr2:179582493;179582492;179582491 |
N2AB | 8053 | 24382;24383;24384 | chr2:178717766;178717765;178717764 | chr2:179582493;179582492;179582491 |
N2A | 7126 | 21601;21602;21603 | chr2:178717766;178717765;178717764 | chr2:179582493;179582492;179582491 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | None | None | None | N | 0.085 | 0.166 | 0.0297737177859 | gnomAD-4.0.0 | 3.42986E-06 | None | None | None | None | N | None | 0 | 0 | None | 3.84645E-05 | 0 | None | 1.88296E-05 | 0 | 2.70256E-06 | 0 | 0 |
H/R | rs1439210373 | -0.303 | 0.007 | N | 0.212 | 0.13 | 0.185906805712 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | N | None | 0 | 2.94E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/R | rs1439210373 | -0.303 | 0.007 | N | 0.212 | 0.13 | 0.185906805712 | gnomAD-4.0.0 | 5.48595E-06 | None | None | None | None | N | None | 0 | 2.25652E-05 | None | 0 | 0 | None | 0 | 0 | 6.30456E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1527 | likely_benign | 0.1539 | benign | 0.14 | Stabilizing | 0.004 | N | 0.198 | neutral | None | None | None | None | N |
H/C | 0.1871 | likely_benign | 0.1806 | benign | 0.714 | Stabilizing | 0.424 | N | 0.281 | neutral | None | None | None | None | N |
H/D | 0.1319 | likely_benign | 0.1515 | benign | -0.093 | Destabilizing | 0.002 | N | 0.198 | neutral | N | 0.46679448 | None | None | N |
H/E | 0.1058 | likely_benign | 0.1067 | benign | -0.047 | Destabilizing | None | N | 0.081 | neutral | None | None | None | None | N |
H/F | 0.2702 | likely_benign | 0.2793 | benign | 0.98 | Stabilizing | 0.059 | N | 0.385 | neutral | None | None | None | None | N |
H/G | 0.2037 | likely_benign | 0.2169 | benign | -0.179 | Destabilizing | 0.02 | N | 0.255 | neutral | None | None | None | None | N |
H/I | 0.1993 | likely_benign | 0.2025 | benign | 0.973 | Stabilizing | 0.009 | N | 0.356 | neutral | None | None | None | None | N |
H/K | 0.1161 | likely_benign | 0.1154 | benign | 0.094 | Stabilizing | 0.004 | N | 0.189 | neutral | None | None | None | None | N |
H/L | 0.0931 | likely_benign | 0.0925 | benign | 0.973 | Stabilizing | None | N | 0.143 | neutral | N | 0.460407225 | None | None | N |
H/M | 0.2993 | likely_benign | 0.2899 | benign | 0.728 | Stabilizing | 0.136 | N | 0.341 | neutral | None | None | None | None | N |
H/N | 0.0725 | likely_benign | 0.0758 | benign | 0.093 | Stabilizing | 0.01 | N | 0.224 | neutral | N | 0.469122709 | None | None | N |
H/P | 0.1366 | likely_benign | 0.1462 | benign | 0.721 | Stabilizing | None | N | 0.106 | neutral | N | 0.482745367 | None | None | N |
H/Q | 0.0713 | likely_benign | 0.0702 | benign | 0.249 | Stabilizing | None | N | 0.085 | neutral | N | 0.42254227 | None | None | N |
H/R | 0.0661 | likely_benign | 0.0669 | benign | -0.582 | Destabilizing | 0.007 | N | 0.212 | neutral | N | 0.441474748 | None | None | N |
H/S | 0.1218 | likely_benign | 0.1241 | benign | 0.211 | Stabilizing | 0.002 | N | 0.101 | neutral | None | None | None | None | N |
H/T | 0.1213 | likely_benign | 0.12 | benign | 0.36 | Stabilizing | 0.003 | N | 0.255 | neutral | None | None | None | None | N |
H/V | 0.1492 | likely_benign | 0.1501 | benign | 0.721 | Stabilizing | 0.01 | N | 0.255 | neutral | None | None | None | None | N |
H/W | 0.3087 | likely_benign | 0.3289 | benign | 1.034 | Stabilizing | 0.932 | D | 0.271 | neutral | None | None | None | None | N |
H/Y | 0.0979 | likely_benign | 0.102 | benign | 1.267 | Stabilizing | 0.088 | N | 0.313 | neutral | N | 0.467661271 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.