Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8387 | 25384;25385;25386 | chr2:178717715;178717714;178717713 | chr2:179582442;179582441;179582440 |
N2AB | 8070 | 24433;24434;24435 | chr2:178717715;178717714;178717713 | chr2:179582442;179582441;179582440 |
N2A | 7143 | 21652;21653;21654 | chr2:178717715;178717714;178717713 | chr2:179582442;179582441;179582440 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.855 | N | 0.327 | 0.149 | 0.185906805712 | gnomAD-4.0.0 | 1.59212E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85963E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1341 | likely_benign | 0.1458 | benign | -0.03 | Destabilizing | 0.046 | N | 0.101 | neutral | N | 0.44193995 | None | None | I |
E/C | 0.8955 | likely_pathogenic | 0.9155 | pathogenic | -0.184 | Destabilizing | 0.999 | D | 0.417 | neutral | None | None | None | None | I |
E/D | 0.1369 | likely_benign | 0.171 | benign | -0.338 | Destabilizing | 0.314 | N | 0.375 | neutral | N | 0.472646859 | None | None | I |
E/F | 0.7296 | likely_pathogenic | 0.7951 | pathogenic | 0.009 | Stabilizing | 0.998 | D | 0.436 | neutral | None | None | None | None | I |
E/G | 0.1946 | likely_benign | 0.2393 | benign | -0.162 | Destabilizing | 0.855 | D | 0.327 | neutral | N | 0.469318552 | None | None | I |
E/H | 0.4887 | ambiguous | 0.5584 | ambiguous | 0.613 | Stabilizing | 0.997 | D | 0.377 | neutral | None | None | None | None | I |
E/I | 0.379 | ambiguous | 0.425 | ambiguous | 0.265 | Stabilizing | 0.986 | D | 0.475 | neutral | None | None | None | None | I |
E/K | 0.149 | likely_benign | 0.1783 | benign | 0.485 | Stabilizing | 0.941 | D | 0.351 | neutral | N | 0.463566016 | None | None | I |
E/L | 0.3685 | ambiguous | 0.4436 | ambiguous | 0.265 | Stabilizing | 0.908 | D | 0.479 | neutral | None | None | None | None | I |
E/M | 0.464 | ambiguous | 0.5119 | ambiguous | 0.037 | Stabilizing | 0.993 | D | 0.414 | neutral | None | None | None | None | I |
E/N | 0.2857 | likely_benign | 0.348 | ambiguous | 0.122 | Stabilizing | 0.821 | D | 0.423 | neutral | None | None | None | None | I |
E/P | 0.3775 | ambiguous | 0.5161 | ambiguous | 0.185 | Stabilizing | 0.005 | N | 0.162 | neutral | None | None | None | None | I |
E/Q | 0.132 | likely_benign | 0.1424 | benign | 0.149 | Stabilizing | 0.958 | D | 0.461 | neutral | N | 0.447847202 | None | None | I |
E/R | 0.2717 | likely_benign | 0.3302 | benign | 0.738 | Stabilizing | 0.977 | D | 0.407 | neutral | None | None | None | None | I |
E/S | 0.1786 | likely_benign | 0.1999 | benign | 0.012 | Stabilizing | 0.307 | N | 0.154 | neutral | None | None | None | None | I |
E/T | 0.2483 | likely_benign | 0.2797 | benign | 0.132 | Stabilizing | 0.887 | D | 0.359 | neutral | None | None | None | None | I |
E/V | 0.2216 | likely_benign | 0.2447 | benign | 0.185 | Stabilizing | 0.841 | D | 0.454 | neutral | N | 0.488251029 | None | None | I |
E/W | 0.9072 | likely_pathogenic | 0.9425 | pathogenic | 0.083 | Stabilizing | 1.0 | D | 0.517 | neutral | None | None | None | None | I |
E/Y | 0.6041 | likely_pathogenic | 0.6859 | pathogenic | 0.243 | Stabilizing | 0.999 | D | 0.428 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.