Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8390 | 25393;25394;25395 | chr2:178717706;178717705;178717704 | chr2:179582433;179582432;179582431 |
N2AB | 8073 | 24442;24443;24444 | chr2:178717706;178717705;178717704 | chr2:179582433;179582432;179582431 |
N2A | 7146 | 21661;21662;21663 | chr2:178717706;178717705;178717704 | chr2:179582433;179582432;179582431 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.871 | N | 0.403 | 0.224 | 0.28798054836 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
Q/L | None | None | 0.164 | N | 0.35 | 0.237 | 0.421550847248 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.195 | likely_benign | 0.2164 | benign | -0.198 | Destabilizing | 0.222 | N | 0.24 | neutral | None | None | None | None | I |
Q/C | 0.6546 | likely_pathogenic | 0.6839 | pathogenic | 0.158 | Stabilizing | 0.987 | D | 0.387 | neutral | None | None | None | None | I |
Q/D | 0.2344 | likely_benign | 0.2702 | benign | 0.133 | Stabilizing | 0.164 | N | 0.254 | neutral | None | None | None | None | I |
Q/E | 0.0646 | likely_benign | 0.0668 | benign | 0.11 | Stabilizing | None | N | 0.089 | neutral | N | 0.415904299 | None | None | I |
Q/F | 0.5553 | ambiguous | 0.6011 | pathogenic | -0.413 | Destabilizing | 0.926 | D | 0.406 | neutral | None | None | None | None | I |
Q/G | 0.2884 | likely_benign | 0.3295 | benign | -0.384 | Destabilizing | 0.567 | D | 0.316 | neutral | None | None | None | None | I |
Q/H | 0.1481 | likely_benign | 0.1605 | benign | -0.284 | Destabilizing | 0.871 | D | 0.403 | neutral | N | 0.517975448 | None | None | I |
Q/I | 0.2816 | likely_benign | 0.2999 | benign | 0.202 | Stabilizing | 0.387 | N | 0.453 | neutral | None | None | None | None | I |
Q/K | 0.0894 | likely_benign | 0.0926 | benign | 0.125 | Stabilizing | 0.164 | N | 0.281 | neutral | N | 0.47791555 | None | None | I |
Q/L | 0.1101 | likely_benign | 0.1195 | benign | 0.202 | Stabilizing | 0.164 | N | 0.35 | neutral | N | 0.512145554 | None | None | I |
Q/M | 0.3259 | likely_benign | 0.342 | ambiguous | 0.409 | Stabilizing | 0.9 | D | 0.409 | neutral | None | None | None | None | I |
Q/N | 0.2218 | likely_benign | 0.2423 | benign | -0.223 | Destabilizing | 0.013 | N | 0.138 | neutral | None | None | None | None | I |
Q/P | 0.3757 | ambiguous | 0.4646 | ambiguous | 0.097 | Stabilizing | 0.593 | D | 0.489 | neutral | N | 0.496621469 | None | None | I |
Q/R | 0.1014 | likely_benign | 0.1077 | benign | 0.241 | Stabilizing | 0.384 | N | 0.295 | neutral | N | 0.500677767 | None | None | I |
Q/S | 0.212 | likely_benign | 0.2339 | benign | -0.226 | Destabilizing | 0.049 | N | 0.114 | neutral | None | None | None | None | I |
Q/T | 0.1553 | likely_benign | 0.1682 | benign | -0.089 | Destabilizing | 0.025 | N | 0.355 | neutral | None | None | None | None | I |
Q/V | 0.1868 | likely_benign | 0.1973 | benign | 0.097 | Stabilizing | 0.005 | N | 0.251 | neutral | None | None | None | None | I |
Q/W | 0.4427 | ambiguous | 0.4965 | ambiguous | -0.394 | Destabilizing | 0.997 | D | 0.412 | neutral | None | None | None | None | I |
Q/Y | 0.3651 | ambiguous | 0.4022 | ambiguous | -0.128 | Destabilizing | 0.975 | D | 0.473 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.