Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8391 | 25396;25397;25398 | chr2:178717703;178717702;178717701 | chr2:179582430;179582429;179582428 |
N2AB | 8074 | 24445;24446;24447 | chr2:178717703;178717702;178717701 | chr2:179582430;179582429;179582428 |
N2A | 7147 | 21664;21665;21666 | chr2:178717703;178717702;178717701 | chr2:179582430;179582429;179582428 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 1.0 | D | 0.824 | 0.847 | 0.911112205665 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4772 | ambiguous | 0.4726 | ambiguous | -1.501 | Destabilizing | 0.993 | D | 0.635 | neutral | D | 0.577335905 | None | None | I |
V/C | 0.9262 | likely_pathogenic | 0.9275 | pathogenic | -1.145 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
V/D | 0.9401 | likely_pathogenic | 0.9609 | pathogenic | -0.872 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
V/E | 0.8944 | likely_pathogenic | 0.9299 | pathogenic | -0.765 | Destabilizing | 0.999 | D | 0.846 | deleterious | D | 0.631742797 | None | None | I |
V/F | 0.3805 | ambiguous | 0.4945 | ambiguous | -0.928 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
V/G | 0.669 | likely_pathogenic | 0.6979 | pathogenic | -1.933 | Destabilizing | 1.0 | D | 0.824 | deleterious | D | 0.631742797 | None | None | I |
V/H | 0.9624 | likely_pathogenic | 0.9782 | pathogenic | -1.443 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
V/I | 0.0873 | likely_benign | 0.1012 | benign | -0.372 | Destabilizing | 0.969 | D | 0.583 | neutral | None | None | None | None | I |
V/K | 0.9395 | likely_pathogenic | 0.9633 | pathogenic | -1.035 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
V/L | 0.399 | ambiguous | 0.5156 | ambiguous | -0.372 | Destabilizing | 0.959 | D | 0.636 | neutral | D | 0.551112018 | None | None | I |
V/M | 0.374 | ambiguous | 0.4583 | ambiguous | -0.448 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | D | 0.593960679 | None | None | I |
V/N | 0.8798 | likely_pathogenic | 0.9198 | pathogenic | -1.001 | Destabilizing | 0.998 | D | 0.854 | deleterious | None | None | None | None | I |
V/P | 0.848 | likely_pathogenic | 0.8777 | pathogenic | -0.714 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | I |
V/Q | 0.9111 | likely_pathogenic | 0.944 | pathogenic | -0.969 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
V/R | 0.9141 | likely_pathogenic | 0.9493 | pathogenic | -0.803 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
V/S | 0.7338 | likely_pathogenic | 0.7721 | pathogenic | -1.716 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | I |
V/T | 0.5395 | ambiguous | 0.5714 | pathogenic | -1.459 | Destabilizing | 0.724 | D | 0.384 | neutral | None | None | None | None | I |
V/W | 0.961 | likely_pathogenic | 0.9785 | pathogenic | -1.17 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
V/Y | 0.8555 | likely_pathogenic | 0.9073 | pathogenic | -0.823 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.