Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8396 | 25411;25412;25413 | chr2:178717688;178717687;178717686 | chr2:179582415;179582414;179582413 |
N2AB | 8079 | 24460;24461;24462 | chr2:178717688;178717687;178717686 | chr2:179582415;179582414;179582413 |
N2A | 7152 | 21679;21680;21681 | chr2:178717688;178717687;178717686 | chr2:179582415;179582414;179582413 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs771290213 | -0.271 | 0.545 | N | 0.335 | 0.21 | 0.0666544352282 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 9.97E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
D/N | rs771290213 | -0.271 | 0.545 | N | 0.335 | 0.21 | 0.0666544352282 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/N | rs771290213 | -0.271 | 0.545 | N | 0.335 | 0.21 | 0.0666544352282 | gnomAD-4.0.0 | 2.56338E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.09098E-05 | 0 | None | 0 | 0 | 2.39403E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5264 | ambiguous | 0.6702 | pathogenic | -0.56 | Destabilizing | 0.998 | D | 0.63 | neutral | N | 0.478535494 | None | None | N |
D/C | 0.9255 | likely_pathogenic | 0.9557 | pathogenic | -0.154 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
D/E | 0.4256 | ambiguous | 0.5633 | ambiguous | -0.379 | Destabilizing | 0.907 | D | 0.443 | neutral | N | 0.449364422 | None | None | N |
D/F | 0.9222 | likely_pathogenic | 0.9619 | pathogenic | -0.183 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
D/G | 0.3174 | likely_benign | 0.4355 | ambiguous | -0.826 | Destabilizing | 0.984 | D | 0.634 | neutral | N | 0.452362935 | None | None | N |
D/H | 0.7311 | likely_pathogenic | 0.8488 | pathogenic | -0.117 | Destabilizing | 1.0 | D | 0.657 | neutral | N | 0.490398778 | None | None | N |
D/I | 0.9272 | likely_pathogenic | 0.9632 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
D/K | 0.8335 | likely_pathogenic | 0.9171 | pathogenic | 0.134 | Stabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
D/L | 0.8616 | likely_pathogenic | 0.9244 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
D/M | 0.9416 | likely_pathogenic | 0.9674 | pathogenic | 0.358 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
D/N | 0.1575 | likely_benign | 0.1706 | benign | -0.388 | Destabilizing | 0.545 | D | 0.335 | neutral | N | 0.454791817 | None | None | N |
D/P | 0.9917 | likely_pathogenic | 0.9961 | pathogenic | -0.084 | Destabilizing | 0.994 | D | 0.681 | prob.neutral | None | None | None | None | N |
D/Q | 0.7691 | likely_pathogenic | 0.8765 | pathogenic | -0.301 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
D/R | 0.8273 | likely_pathogenic | 0.9166 | pathogenic | 0.37 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
D/S | 0.3487 | ambiguous | 0.4462 | ambiguous | -0.523 | Destabilizing | 0.991 | D | 0.603 | neutral | None | None | None | None | N |
D/T | 0.8078 | likely_pathogenic | 0.8822 | pathogenic | -0.297 | Destabilizing | 0.994 | D | 0.675 | neutral | None | None | None | None | N |
D/V | 0.771 | likely_pathogenic | 0.8744 | pathogenic | -0.084 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | N | 0.484068902 | None | None | N |
D/W | 0.977 | likely_pathogenic | 0.9897 | pathogenic | 0.078 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
D/Y | 0.5471 | ambiguous | 0.7064 | pathogenic | 0.089 | Stabilizing | 1.0 | D | 0.669 | neutral | N | 0.513529463 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.